Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008917.1 Length=3343 Score E Sequences producing significant alignments: (Bits) Value seq9855 113 1e-21 seq6422 113 1e-21 seq2447 98.7 2e-17 >seq9855 Length=15086 Score = 113 bits (124), Expect = 1e-21 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 998 TATATATACCTCTTTAAGATATATAACTTTATTTAAAGAGTTACATATAAAATATCACAG 1057 ||| |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| Sbjct 3148 TATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAG 3207 Query 1058 CCATGCGAATTAATATAGGCCTATAGTAAATCAAG 1092 ||| | ||| |||||||| |||| |||| || || Sbjct 3208 CCACGGGAAATAATATAGAGCTATGGTAAGTCTAG 3242 >seq6422 Length=30189 Score = 113 bits (124), Expect = 1e-21 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 998 TATATATACCTCTTTAAGATATATAACTTTATTTAAAGAGTTACATATAAAATATCACAG 1057 ||| |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| Sbjct 21132 TATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAG 21191 Query 1058 CCATGCGAATTAATATAGGCCTATAGTAAATCAAG 1092 ||| | ||| |||||||| |||| |||| || || Sbjct 21192 CCACGGGAAATAATATAGAGCTATGGTAAGTCTAG 21226 >seq2447 Length=64305 Score = 98.7 bits (108), Expect = 2e-17 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 995 TCTTATATATACCTCTTTAAGATATATAACTTTATTTAAAGAGTTACATATAAAATATCA 1054 || ||| |||||||||||||||||||||| |||||||||||||| ||||||| | || Sbjct 3244 TCCTATTTATACCTCTTTAAGATATATAAACTTATTTAAAGAGTTTGATATAAATAACCA 3185 Query 1055 CAGCCATGCGAATTAATATAGGCCTATAGTAAATCAAGAATTGA 1098 |||||| ||| | ||||| |||||| ||||| ||||| || Sbjct 3184 CAGCCACAAGAAATCGTATAGAGCTATAGCAAATCTAGAATAGA 3141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 10582612760220