Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008919.1 Length=3391 Score E Sequences producing significant alignments: (Bits) Value seq6422 125 2e-25 seq9855 120 7e-24 seq2447 100 6e-18 >seq6422 Length=30189 Score = 125 bits (138), Expect = 2e-25 Identities = 87/99 (88%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 561 GCTTATATTATATGCTATCTATACCTCTTTAAGATAAATATAATTATGAAAAGAGTTATA 620 ||||||| |||||||||| ||||||||||||||||| ||| | ||||| ||||||||| | Sbjct 21117 GCTTATACTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACA 21176 Query 621 TATAAAATACCACAGCCACAAGAATTAATATAAATCTAT 659 ||||||||||||||||||| ||| ||||||| | |||| Sbjct 21177 TATAAAATACCACAGCCACGGGAAATAATATAGAGCTAT 21215 >seq9855 Length=15086 Score = 120 bits (132), Expect = 7e-24 Identities = 86/99 (87%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 561 GCTTATATTATATGCTATCTATACCTCTTTAAGATAAATATAATTATGAAAAGAGTTATA 620 ||||| | |||||||||| ||||||||||||||||| ||| | ||||| ||||||||| | Sbjct 3133 GCTTACACTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACA 3192 Query 621 TATAAAATACCACAGCCACAAGAATTAATATAAATCTAT 659 ||||||||||||||||||| ||| ||||||| | |||| Sbjct 3193 TATAAAATACCACAGCCACGGGAAATAATATAGAGCTAT 3231 >seq2447 Length=64305 Score = 100 bits (110), Expect = 6e-18 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 555 TATATTGCTTATATTATATGCTATCTATACCTCTTTAAGATAAATATAATTATGAAAAGA 614 ||||| ||| | ||| | |||| ||||||||||||||||| ||| | |||| ||||| Sbjct 3262 TATATAGCTAGTTCTATTTCCTATTTATACCTCTTTAAGATATATAAACTTATTTAAAGA 3203 Query 615 GTTATATATAAAATACCACAGCCACAAGAATTAATATAAATCTATAGCAGTTTCAGAATA 674 ||| ||||||| |||||||||||||||| | |||| | |||||||| | |||||| Sbjct 3202 GTTTGATATAAATAACCACAGCCACAAGAAATCGTATAGAGCTATAGCAAATCTAGAATA 3143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 10736169414540