Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008920.1
Length=3403
Score E
Sequences producing significant alignments: (Bits) Value
seq6422 118 2e-23
seq9855 116 8e-23
seq2447 100 6e-18
>seq6422
Length=30189
Score = 118 bits (130), Expect = 2e-23
Identities = 151/204 (74%), Gaps = 7/204 (3%)
Strand=Plus/Minus
Query 3101 ATATTATTTATCGTGGCTGTGGTATTTTATATATAACTCTTTCAATAATAGTTTATATCT 3160
||||||||| ||||||||||||||||||||| ||||||||| |||| | |||||||
Sbjct 21207 ATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCT 21148
Query 3161 TAAAGAGGCATTAGTAAGATATAGCATTAGCTATATAAGTATAGAAATATATAGCTA-AT 3219
|||||||| || | || |||||| || ||||| | ||||||| ||| |||| |
Sbjct 21147 TAAAGAGGTATAAATAGCATATAGTATAAGCTA---ACAGCTAGAAATGTATTGCTATAG 21091
Query 3220 GGTATAGCCGATGTAAGCTATATGAATATTGAGTGTGATTTAAAGCTAAGGCGGGATGCG 3279
|| |||||| || ||| |||||||| || ||| | | ||||| ||| | ||| |
Sbjct 21090 GGCATAGCCAATAAAAGTTATATGAAAATATAGTAT-AGCATAAGCTGAGGTGAGAT--G 21034
Query 3280 AGATGGCTAGCCATACTCGCCACC 3303
| ||| |||| || |||||||
Sbjct 21033 ATCTGGGCTGCCACACCCGCCACC 21010
>seq9855
Length=15086
Score = 116 bits (128), Expect = 8e-23
Identities = 183/254 (72%), Gaps = 10/254 (4%)
Strand=Plus/Minus
Query 3052 TGTGGCGAGTGTGGTTGACCACAGTCTA-TCCTAGAGTTCCTATCTTTTCATATTATTTA 3110
|||||| | |||| || ||| | |||| | ||||| || | || | |||||||||
Sbjct 3271 TGTGGCAAACGTGGCTG-CCA-ATTCTAGTACTAGACTTACCATAGCTCTATATTATTTC 3214
Query 3111 TCGTGGCTGTGGTATTTTATATATAACTCTTTCAATAATAGTTTATATCTTAAAGAGGCA 3170
||||||||||||||||||||| ||||||||| |||| | ||||||||||||||| |
Sbjct 3213 CCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTA 3154
Query 3171 TTAGTAAGATATAGCATTAGCTATATAAGTATAGAAATATATAGCTA-ATGGTATAGCCG 3229
| | || |||||| | ||||| | ||||||| ||| |||| | || ||||||
Sbjct 3153 TAAATAGCATATAGTGTAAGCTA---ACAGCTAGAAATGTATTGCTATAGGGCATAGCCA 3097
Query 3230 ATGTAAGCTATATGAATATTGAGTGTGATTTAAAGCTAAGGCGGGATGCGAGATGGCTAG 3289
|| ||| |||||||| || ||| | | ||||| ||| | ||| || ||| |
Sbjct 3096 ATAAAAGTTATATGAAAATATAGTAT-AGCATAAGCTGAGGTGTGAT--GATCTGGGCTG 3040
Query 3290 CCATACTCGCCACC 3303
||| || |||||||
Sbjct 3039 CCACACCCGCCACC 3026
>seq2447
Length=64305
Score = 100 bits (110), Expect = 6e-18
Identities = 106/137 (77%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 3076 TCTATCCTAGAGTTCCTATCTTTTCATATTATTTATCGTGGCTGTGGTATTTTATATATA 3135
||||| ||||| || |||| | ||| |||| | ||||||||||| ||||||| |
Sbjct 3141 TCTATTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATATCAA 3200
Query 3136 ACTCTTTCAATAATAGTTTATATCTTAAAGAGGCATTAGTAAGATATAGCATTAGCTATA 3195
||||||| ||||| | ||||||||||||||| || | || || |||| | ||||||||
Sbjct 3201 ACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAATAGAACTAGCTATA 3260
Query 3196 TAAGTATAGAAATATAT 3212
| ||| ||||||| |||
Sbjct 3261 T-AGT-TAGAAATGTAT 3275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 10774558578120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |