Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008920.1 Length=3403 Score E Sequences producing significant alignments: (Bits) Value seq6422 118 2e-23 seq9855 116 8e-23 seq2447 100 6e-18 >seq6422 Length=30189 Score = 118 bits (130), Expect = 2e-23 Identities = 151/204 (74%), Gaps = 7/204 (3%) Strand=Plus/Minus Query 3101 ATATTATTTATCGTGGCTGTGGTATTTTATATATAACTCTTTCAATAATAGTTTATATCT 3160 ||||||||| ||||||||||||||||||||| ||||||||| |||| | ||||||| Sbjct 21207 ATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCT 21148 Query 3161 TAAAGAGGCATTAGTAAGATATAGCATTAGCTATATAAGTATAGAAATATATAGCTA-AT 3219 |||||||| || | || |||||| || ||||| | ||||||| ||| |||| | Sbjct 21147 TAAAGAGGTATAAATAGCATATAGTATAAGCTA---ACAGCTAGAAATGTATTGCTATAG 21091 Query 3220 GGTATAGCCGATGTAAGCTATATGAATATTGAGTGTGATTTAAAGCTAAGGCGGGATGCG 3279 || |||||| || ||| |||||||| || ||| | | ||||| ||| | ||| | Sbjct 21090 GGCATAGCCAATAAAAGTTATATGAAAATATAGTAT-AGCATAAGCTGAGGTGAGAT--G 21034 Query 3280 AGATGGCTAGCCATACTCGCCACC 3303 | ||| |||| || ||||||| Sbjct 21033 ATCTGGGCTGCCACACCCGCCACC 21010 >seq9855 Length=15086 Score = 116 bits (128), Expect = 8e-23 Identities = 183/254 (72%), Gaps = 10/254 (4%) Strand=Plus/Minus Query 3052 TGTGGCGAGTGTGGTTGACCACAGTCTA-TCCTAGAGTTCCTATCTTTTCATATTATTTA 3110 |||||| | |||| || ||| | |||| | ||||| || | || | ||||||||| Sbjct 3271 TGTGGCAAACGTGGCTG-CCA-ATTCTAGTACTAGACTTACCATAGCTCTATATTATTTC 3214 Query 3111 TCGTGGCTGTGGTATTTTATATATAACTCTTTCAATAATAGTTTATATCTTAAAGAGGCA 3170 ||||||||||||||||||||| ||||||||| |||| | ||||||||||||||| | Sbjct 3213 CCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTA 3154 Query 3171 TTAGTAAGATATAGCATTAGCTATATAAGTATAGAAATATATAGCTA-ATGGTATAGCCG 3229 | | || |||||| | ||||| | ||||||| ||| |||| | || |||||| Sbjct 3153 TAAATAGCATATAGTGTAAGCTA---ACAGCTAGAAATGTATTGCTATAGGGCATAGCCA 3097 Query 3230 ATGTAAGCTATATGAATATTGAGTGTGATTTAAAGCTAAGGCGGGATGCGAGATGGCTAG 3289 || ||| |||||||| || ||| | | ||||| ||| | ||| || ||| | Sbjct 3096 ATAAAAGTTATATGAAAATATAGTAT-AGCATAAGCTGAGGTGTGAT--GATCTGGGCTG 3040 Query 3290 CCATACTCGCCACC 3303 ||| || ||||||| Sbjct 3039 CCACACCCGCCACC 3026 >seq2447 Length=64305 Score = 100 bits (110), Expect = 6e-18 Identities = 106/137 (77%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 3076 TCTATCCTAGAGTTCCTATCTTTTCATATTATTTATCGTGGCTGTGGTATTTTATATATA 3135 ||||| ||||| || |||| | ||| |||| | ||||||||||| ||||||| | Sbjct 3141 TCTATTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATATCAA 3200 Query 3136 ACTCTTTCAATAATAGTTTATATCTTAAAGAGGCATTAGTAAGATATAGCATTAGCTATA 3195 ||||||| ||||| | ||||||||||||||| || | || || |||| | |||||||| Sbjct 3201 ACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAATAGAACTAGCTATA 3260 Query 3196 TAAGTATAGAAATATAT 3212 | ||| ||||||| ||| Sbjct 3261 T-AGT-TAGAAATGTAT 3275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 10774558578120