Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008921.1 Length=3498 Score E Sequences producing significant alignments: (Bits) Value seq9855 120 7e-24 seq6422 118 2e-23 seq2447 105 1e-19 >seq9855 Length=15086 Score = 120 bits (132), Expect = 7e-24 Identities = 156/209 (75%), Gaps = 14/209 (7%) Strand=Plus/Minus Query 2524 ATAGATTTATATTAATTCTTGTGGCTGTGGtattttatatataactcttttaataattat 2583 |||| | ||||||| ||| |||||||||||||||||||| ||||||||| |||| | | Sbjct 3231 ATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTT 3172 Query 2584 atatatcttaaagaggtaaatatagtataaatatgataGCTATGTGAATAGAAATTAATA 2643 |||||||||||||||||| | |||| ||| | || ||||| | ||||||| || Sbjct 3171 ATATATCTTAAAGAGGTATAAATAGCATATAG-TGTAAGCTAACAGC-TAGAAATGTATT 3114 Query 2644 GCTAT-GGACATAGTCATGAA--GGTAT-------TGTAGTATAAATATAAGCTAAGGTG 2693 ||||| || ||||| || || | ||| | ||||||| ||||||| ||||| Sbjct 3113 GCTATAGGGCATAGCCAATAAAAGTTATATGAAAATATAGTATAGC-ATAAGCTGAGGTG 3055 Query 2694 GGATAGGAATTGGCCGCCACACCCGCCAC 2722 ||| | | ||| |||||||||||||| Sbjct 3054 TGAT-GATCTGGGCTGCCACACCCGCCAC 3027 >seq6422 Length=30189 Score = 118 bits (130), Expect = 2e-23 Identities = 157/210 (75%), Gaps = 16/210 (8%) Strand=Plus/Minus Query 2524 ATAGATTTATATTAATTCTTGTGGCTGTGGtattttatatataactcttttaataattat 2583 |||| | ||||||| ||| |||||||||||||||||||| ||||||||| |||| | | Sbjct 21215 ATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTT 21156 Query 2584 atatatcttaaagaggtaaatatagtataaa-tatgataGCTATGTGAATAGAAATTAAT 2642 |||||||||||||||||| | |||| ||| | ||| | |||| | ||||||| || Sbjct 21155 ATATATCTTAAAGAGGTATAAATAGCATATAGTATAA--GCTAACAGC-TAGAAATGTAT 21099 Query 2643 AGCTAT-GGACATAGTCATGAA--GGTAT-------TGTAGTATAAATATAAGCTAAGGT 2692 ||||| || ||||| || || | ||| | ||||||| ||||||| |||| Sbjct 21098 TGCTATAGGGCATAGCCAATAAAAGTTATATGAAAATATAGTATAGC-ATAAGCTGAGGT 21040 Query 2693 GGGATAGGAATTGGCCGCCACACCCGCCAC 2722 | ||| | | ||| |||||||||||||| Sbjct 21039 GAGAT-GATCTGGGCTGCCACACCCGCCAC 21011 >seq2447 Length=64305 Score = 105 bits (116), Expect = 1e-19 Identities = 114/146 (78%), Gaps = 5/146 (3%) Strand=Plus/Plus Query 2495 TGGCTGGTCAATCT-TATTCTTAAACTGCTATAGATTTATATTAATTCTTGTGGCTGTGG 2553 |||| || | |||| |||||| | |||||||| | |||| | ||||||||||||||| Sbjct 3129 TGGC-GGACCATCTCTATTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGG 3187 Query 2554 tattttatatataactcttttaataattatatatatcttaaagaggtaaatatagtataa 2613 | ||||||| |||||||| ||||| | ||||||||||||||||||| | |||| || Sbjct 3188 TTATTTATATCAAACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAG--GAA 3245 Query 2614 atatga-taGCTATGTGAATAGAAAT 2638 ||| | ||||||| | ||||||| Sbjct 3246 ATAGAACTAGCTATATAGTTAGAAAT 3271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11078472789795