Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008922.1
Length=3519
Score E
Sequences producing significant alignments: (Bits) Value
seq6422 149 1e-32
seq9855 145 2e-31
seq2447 141 2e-30
seq16437 109 1e-20
seq7981 102 2e-18
seq1896 98.7 2e-17
seq6263 95.1 3e-16
>seq6422
Length=30189
Score = 149 bits (164), Expect = 1e-32
Identities = 152/193 (79%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 3322 CTAGAATTCCTATAGCTTTA-ATTATTTCCTGTGGCTGTGGTACTTTATTATTAACTCTT 3380
||||| || | |||||| || ||||||||| |||||||||||| ||||| ||||||||
Sbjct 21226 CTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTT 21167
Query 3381 TTAATAGTTATAAATATCTTAAAGAGGTAAAAATAGTAAATAGCACTAGCTATATACCTA 3440
| ||| | || |||||||||||||||| |||||| | |||| | ||||| | | |||
Sbjct 21166 TACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAGTATAAGCTA-ACAGCTA 21108
Query 3441 GAAATATATTGCTATA-AGTATAGACACTAAAAGCTATAGGAATATAAAGTATAAATATA 3499
||||| |||||||||| | |||| || |||||| |||| ||| ||| ||||| | |||
Sbjct 21107 GAAATGTATTGCTATAGGGCATAGCCAATAAAAGTTATATGAAAATATAGTAT-AGCATA 21049
Query 3500 AGCTGCGATGGGA 3512
||||| | || ||
Sbjct 21048 AGCTGAGGTGAGA 21036
>seq9855
Length=15086
Score = 145 bits (160), Expect = 2e-31
Identities = 151/193 (78%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 3322 CTAGAATTCCTATAGCTTTA-ATTATTTCCTGTGGCTGTGGTACTTTATTATTAACTCTT 3380
||||| || | |||||| || ||||||||| |||||||||||| ||||| ||||||||
Sbjct 3242 CTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTT 3183
Query 3381 TTAATAGTTATAAATATCTTAAAGAGGTAAAAATAGTAAATAGCACTAGCTATATACCTA 3440
| ||| | || |||||||||||||||| |||||| | |||| ||||| | | |||
Sbjct 3182 TACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAGTGTAAGCTA-ACAGCTA 3124
Query 3441 GAAATATATTGCTATA-AGTATAGACACTAAAAGCTATAGGAATATAAAGTATAAATATA 3499
||||| |||||||||| | |||| || |||||| |||| ||| ||| ||||| | |||
Sbjct 3123 GAAATGTATTGCTATAGGGCATAGCCAATAAAAGTTATATGAAAATATAGTAT-AGCATA 3065
Query 3500 AGCTGCGATGGGA 3512
||||| | || ||
Sbjct 3064 AGCTGAGGTGTGA 3052
>seq2447
Length=64305
Score = 141 bits (156), Expect = 2e-30
Identities = 143/180 (79%), Gaps = 6/180 (3%)
Strand=Plus/Plus
Query 3319 ATTCTAGAATTCCTATAGCTTTA-ATTATTTCCTGTGGCTGTGGTACTTTATTATTAACT 3377
|||||||| || |||||||| || | ||||| |||||||||||| ||||| ||||
Sbjct 3144 ATTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATATCAAACT 3203
Query 3378 CTTTTAATAGTTATAAATATCTTAAAGAGGTAAAAATAGTAAATAGCACTAGCTATATAC 3437
|||| |||| | || |||||||||||||||| |||||| |||||| ||||||||||||
Sbjct 3204 CTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAATAGAACTAGCTATATAG 3263
Query 3438 CTAGAAATATATTGCTATAAGTATAGACACTAAAAGCTATAGGAA--TATAA-AGTATAA 3494
||||||| |||| ||||| ||| || || ||| ||||| || ||||| |||||||
Sbjct 3264 TTAGAAATGTATTATAATAAGCGTAGTCA-TATAAG-TATAGTAAATTATAATAGTATAA 3321
>seq16437
Length=3918
Score = 109 bits (120), Expect = 1e-20
Identities = 106/130 (82%), Gaps = 6/130 (5%)
Strand=Plus/Minus
Query 3387 GTTATAAATATCTTAAAGAGGTAAAAATAGTAAATAGCACTAGCTATATACCTAGAAATA 3446
||||| |||||||||||||||| |||||| |||||| |||||||||||| |||||||
Sbjct 1169 GTTATTTATATCTTAAAGAGGTATAAATAGGAAATAGAACTAGCTATATAGTTAGAAATG 1110
Query 3447 TATTGCTATAAGTATAGACACTAAAAGCTATAGGAA--TATAA-AGTATAAATATAAGCT 3503
|||| ||||| ||| || |||||| ||||| || ||||| ||||| ||||||||||
Sbjct 1109 TATTATAATAAGCGTAGTCA-TAAAAG-TATAGTAAATTATAATAGTAT-AATATAAGCT 1053
Query 3504 GCGATGGGAC 3513
| | | ||||
Sbjct 1052 GAGGTTGGAC 1043
>seq7981
Length=21338
Score = 102 bits (112), Expect = 2e-18
Identities = 113/148 (76%), Gaps = 12/148 (8%)
Strand=Plus/Minus
Query 3373 TAACTCTTTTAATA-----GTTATAAATATCTTAAAGAGGTAAAAATAGTAAATAGCACT 3427
|||||||||||||| ||| |||||||| ||||||| || |||||| | || | | |
Sbjct 10340 TAACTCTTTTAATACCCAAGTT-TAAATATCCTAAAGAGATAGAAATAGGATATGGTATT 10282
Query 3428 AGCTATA----TACCTAGAAATATATTGCTATAAGTATAGACACTAAAAGCTATAGGAAT 3483
||||||| | ||||||| ||| ||| | |||||| | ||||||||||||||||
Sbjct 10281 AGCTATAGGTGTGGCTAGAAAGGTATAACTAAAGGTATAGCCGTTAAAAGCTATAGGAAT 10222
Query 3484 ATA--AAGTATAAATATAAGCTGCGATG 3509
||| |||||||||||| ||| ||||
Sbjct 10221 ATATGGTGTATAAATATAAACTGTGATG 10194
>seq1896
Length=105120
Score = 98.7 bits (108), Expect = 2e-17
Identities = 109/141 (77%), Gaps = 7/141 (5%)
Strand=Plus/Minus
Query 3319 ATTCTAGAATTCCTATAGCTTTA-ATTATTTCCTGTGGCTGTGGTACTTTATTATT-AAC 3376
|| ||||| || ||||||||||| || ||||| ||||||||||||| ||||| || ||
Sbjct 45767 ATCCTAGATTTACTATAGCTTTATATAATTTCTTGTGGCTGTGGTATTTTATAGTTTAAA 45708
Query 3377 TCTTTTAATAGTTATAAATATCTTAAAGAGGTAAAAATAGTAA-ATAGCACTAGCTATAT 3435
| ||| ||| ||||| |||| ||| || | |||||| ||||||||||||| |
Sbjct 45707 TAATTTTATACTTATA----TCTTGAAGGGGAATAAATAGGGTTATAGCACTAGCTAGAG 45652
Query 3436 ACCTAGAAATATATTGCTATA 3456
||||| |||| |||||||||
Sbjct 45651 ACCTAATAATAAATTGCTATA 45631
>seq6263
Length=31128
Score = 95.1 bits (104), Expect = 3e-16
Identities = 95/122 (78%), Gaps = 6/122 (5%)
Strand=Plus/Plus
Query 3398 CTTAAAGAGGTAAAAATAGTAAATAGCACTAGCTATATACCTAGAAATATATTGCTATAA 3457
||||||||| || |||||| | || | | ||||||||| ||||||| ||| |||| |
Sbjct 12660 CTTAAAGAGATATAAATAGGATATGGTATTAGCTATATGGCTAGAAAGGTATAGCTAAAG 12719
Query 3458 GTATAGACAC----TAAAAGCTATAGGAATATAAAG--TATAAATATAAGCTGCGATGGG 3511
|||||| | ||||||||||| ||||||| || ||||||||||||||| |||| |
Sbjct 12720 GTATAGGTAGCCGTTAAAAGCTATACGAATATATAGTATATAAATATAAGCTGTGATGAG 12779
Query 3512 AC 3513
||
Sbjct 12780 AC 12781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 11145653826060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |