Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008925.1 Length=3821 Score E Sequences producing significant alignments: (Bits) Value seq1249 93.3 1e-15 seq18662 89.7 1e-14 >seq1249 Length=132591 Score = 93.3 bits (102), Expect = 1e-15 Identities = 137/190 (72%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 2923 AAAACCCCGGAACATGTGGAACATGCCCAT-TTTGACCCACTGAAGGTGGTCAAAATGAA 2981 || |||||||||||||||||||||| || | ||||||||| | || | ||| || | Sbjct 111280 AACACCCCGGAACATGTGGAACATGACCCTGTTTGACCCATTTGAGTTCGTCTAATTTTG 111221 Query 2982 AAGATAAAAATACCTTCACAAAGCGCGACTTACTGGCAAGTCGGATCGAGAATAAAATTT 3041 || | ||||||| ||| ||| | || | || || || |||| ||||||||||||| Sbjct 111220 AAAAAAAAAATAGTGTCAGGTAGCTTGGCTCATTGACAGGTTGGATAGAGAATAAAATTT 111161 Query 3042 TGGATATTTCCAAGT-TTTCATTGGTTTAAATGATATTTTGTAAAACACTAACTCGGAAC 3100 || | |||||| | |||||||| || ||||||| ||| | || || ||||| Sbjct 111160 CCGA-AATTCCAATTCTTTCATTGCAAAGAAAAATATTTTCCAAATGATTACCTTGGAAC 111102 Query 3101 AATTGGTGGA 3110 | || ||||| Sbjct 111101 ACTTTGTGGA 111092 >seq18662 Length=2626 Score = 89.7 bits (98), Expect = 1e-14 Identities = 136/190 (72%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 2923 AAAACCCCGGAACATGTGGAACATGCCCAT-TTTGACCCACTGAAGGTGGTCAAAATGAA 2981 || |||||||||||||||||||||| || | |||||||| | || | ||| || | Sbjct 46 AACACCCCGGAACATGTGGAACATGACCCTGTTTGACCCGTTTGAGTTTGTCTAATTTTG 105 Query 2982 AAGATAAAAATACCTTCACAAAGCGCGACTTACTGGCAAGTCGGATCGAGAATAAAATTT 3041 || | ||||||| ||| ||| | || | || || || |||| ||||||||||||| Sbjct 106 AAAAAAAAAATAGTGTCAGGTAGCTTGGCTCATTGACAGGTTGGATAGAGAATAAAATTT 165 Query 3042 TGGATATTTCCAAGT-TTTCATTGGTTTAAATGATATTTTGTAAAACACTAACTCGGAAC 3100 || | |||||| | |||||||| || ||||||| ||| | || || ||||| Sbjct 166 CCGA-AATTCCAATTCTTTCATTGCAAAGAAAAATATTTTCCAAATAATTACCTTGGAAC 224 Query 3101 AATTGGTGGA 3110 | || ||||| Sbjct 225 ACTTTGTGGA 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12111781109490