Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008931.1
Length=4886
Score E
Sequences producing significant alignments: (Bits) Value
seq9855 122 3e-24
seq6422 122 3e-24
seq16437 80.6 8e-12
>seq9855
Length=15086
Score = 122 bits (134), Expect = 3e-24
Identities = 180/262 (69%), Gaps = 3/262 (1%)
Strand=Plus/Plus
Query 3545 GTGGCGGGTGTGGCGGCCAATTCCAATCCCACCTCAGCTTATGTTtataccatatactta 3604
|||||||||||||| ||| | || || |||||||||||||| | |||| |||| | |
Sbjct 3027 GTGGCGGGTGTGGCAGCCCAGATCA-TCACACCTCAGCTTATGCT-ATACTATATTTTCA 3084
Query 3605 tatagcttatagtgtctatgctctatagcaatatattcctagctatatagctaATGCTAC 3664
|||| ||| || || |||||| ||||||||||| ||| |||||| | ||||| | |||
Sbjct 3085 TATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCTTACACTAT 3143
Query 3665 ATTATATCTATACCTCTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACC 3724
|| ||| ||||||||||||||| ||||
Sbjct 3144 ATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACC 3203
Query 3725 ACAGCCACGGAAAATAATATTAAGCTATTGTAAATCTAGAATTAGAAATTGCTGTCATAC 3784
|||||||||| ||||||||| |||||| |||| ||||| | ||||| | || | ||
Sbjct 3204 ACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAGAATTGGCAGCCACGT 3263
Query 3785 TCGCCACACTCGTGTCTCCGGT 3806
| |||||| | |||| ||||
Sbjct 3264 TTGCCACATCAGCGTCTTCGGT 3285
>seq6422
Length=30189
Score = 122 bits (134), Expect = 3e-24
Identities = 159/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 3545 GTGGCGGGTGTGGCGGCCAATTCCAATCCCACCTCAGCTTATGTTtataccatatactta 3604
|||||||||||||| ||| | || || |||||||||||||| | |||| |||| | |
Sbjct 21011 GTGGCGGGTGTGGCAGCCCAGATCA-TCTCACCTCAGCTTATGCT-ATACTATATTTTCA 21068
Query 3605 tatagcttatagtgtctatgctctatagcaatatattcctagctatatagctaATGCTAC 3664
|||| ||| || || |||||| ||||||||||| ||| |||||| | ||||| || |||
Sbjct 21069 TATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCTTATACTAT 21127
Query 3665 ATTATATCTATACCTCTTTAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACC 3724
|| ||| ||||||||||||||| ||||
Sbjct 21128 ATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACC 21187
Query 3725 ACAGCCACGGAAAATAATATTAAGCTATTGTAAATCTAGAATTAGAA 3771
|||||||||| ||||||||| |||||| |||| ||||| | |||||
Sbjct 21188 ACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAGAA 21234
>seq16437
Length=3918
Score = 80.6 bits (88), Expect = 8e-12
Identities = 119/157 (76%), Gaps = 10/157 (6%)
Strand=Plus/Plus
Query 3535 AAGTC-GCGATGTGGCGGGTGTGGCGGCCAATTCCAATCCCACCTCAGCTTATGTTtata 3593
||||| ||| ||| || |||| ||||| | |||| ||| |||||||||||| || |||
Sbjct 1009 AAGTCTGCG-TGTAGCAGGTG-GGCGGGTATATCCAGTCCAACCTCAGCTTATATT-ATA 1065
Query 3594 ccat-atactta--tatagcttatagtgtctatgctctatagcaatatattcctagctat 3650
| || ||| || |||| ||| || || ||| ||| ||| |||| ||| ||| ||||
Sbjct 1066 CTATTATAATTTACTATA-CTTTTA-TGACTACGCT-TATTATAATACATTTCTAACTAT 1122
Query 3651 atagctaATGCTACATTATATCTATACCTCTTTAAGA 3687
||||||| | ||| | ||| |||||||||||||||
Sbjct 1123 ATAGCTAGTTCTATTTCCTATTTATACCTCTTTAAGA 1159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15518819377215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |