Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008936.1
Length=2588
Score E
Sequences producing significant alignments: (Bits) Value
seq9855 168 1e-38
seq6422 161 2e-36
seq2447 116 6e-23
seq2536 78.8 2e-11
>seq9855
Length=15086
Score = 168 bits (186), Expect = 1e-38
Identities = 209/275 (76%), Gaps = 11/275 (4%)
Strand=Plus/Plus
Query 12 GGAAGACTTCGATTTGAAAGTG-TGGCGGGTGTGGCGGCCAATTCCTATCCCACCTTACC 70
||||| | ||||| |||| || ||||||||||||| ||| | | ||| ||||| | |
Sbjct 3005 GGAAGTCCCCGATTGGAAATTGGTGGCGGGTGTGGCAGCCCAGATC-ATCACACCTCAGC 3063
Query 71 TTATATTTATAATGGATATTTTTATTTAGTCTTTACTGGCTAT-ACTTATAGCAATACAC 129
|||| |||| | ||||||| || || |||| ||||||| | ||||||||||||
Sbjct 3064 TTAT-GCTATACT--ATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATACAT 3120
Query 130 ACTTACCTATATAGCTATCAttatatgccatatatacctctttaagaaatataatattat 189
|| || | ||||| || ||||||| || ||||||||||||||| |||||| ||||
Sbjct 3121 TTCTAGCTGT-TAGCTTACACTATATGCTATTTATACCTCTTTAAGATATATAAACTTAT 3179
Query 190 tgaaagagttatatataaaataCCACAGCCACAGAAAATAATATGAAGCTATAGATATTC 249
||||||||| |||||||||||||||||||| | ||||||||| |||||| | | ||
Sbjct 3180 GTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGTC 3239
Query 250 TAGAA--TGAATGTGGTCAGCCATAGTCGCCACAT 282
||| | |||| ||| |||||| | |||||||
Sbjct 3240 TAGTACTAGAAT-TGG-CAGCCACGTTTGCCACAT 3272
>seq6422
Length=30189
Score = 161 bits (178), Expect = 2e-36
Identities = 186/243 (77%), Gaps = 7/243 (3%)
Strand=Plus/Plus
Query 12 GGAAGACTTCGATTTGAAAGTG-TGGCGGGTGTGGCGGCCAATTCCTATCCCACCTTACC 70
||||| | ||||| |||| || ||||||||||||| ||| | | ||| ||||| | |
Sbjct 20989 GGAAGTCCCCGATTGGAAATTGGTGGCGGGTGTGGCAGCCCAGATC-ATCTCACCTCAGC 21047
Query 71 TTATATTTATAATGGATATTTTTATTTAGTCTTTACTGGCTAT-ACTTATAGCAATACAC 129
|||| |||| | ||||||| || || |||| ||||||| | ||||||||||||
Sbjct 21048 TTAT-GCTATACT--ATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATACAT 21104
Query 130 ACTTACCTATATAGCTATCAttatatgccatatatacctctttaagaaatataatattat 189
|| || | ||||| | ||||||| || ||||||||||||||| |||||| ||||
Sbjct 21105 TTCTAGCTGT-TAGCTTATACTATATGCTATTTATACCTCTTTAAGATATATAAACTTAT 21163
Query 190 tgaaagagttatatataaaataCCACAGCCACAGAAAATAATATGAAGCTATAGATATTC 249
||||||||| |||||||||||||||||||| | ||||||||| |||||| | | ||
Sbjct 21164 GTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGTC 21223
Query 250 TAG 252
|||
Sbjct 21224 TAG 21226
>seq2447
Length=64305
Score = 116 bits (128), Expect = 6e-23
Identities = 155/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 107 TGGCTATACTTATAGCAATACACACTTACCTATATAGCTATCAttatatgccatatatac 166
|| ||| ||||| |||||| || ||||||||||| ||| | | || |||||
Sbjct 3292 TGACTACGCTTATTATAATACATTTCTAACTATATAGCTAGTTCTATTTCCTATTTATAC 3233
Query 167 ctctttaagaaatataatattattgaaagagttatatataaaataCCACAGCCACAGAAA 226
|||||||||| |||||| ||||| |||||||| ||||||| |||||||||||| ||
Sbjct 3232 CTCTTTAAGATATATAAACTTATTTAAAGAGTTTGATATAAATAACCACAGCCACAAGAA 3173
Query 227 ATAATATGAAGCTATAGATATTCTAGAATGAATGTGGTCAGCCA--TAGTCGCCACATTC 284
|| ||| |||||||| | |||||||| | ||||| |||| | | | ||| |
Sbjct 3172 ATCGTATAGAGCTATAGCAAATCTAGAATAGAGATGGTCCGCCACCCAACCACAACACT- 3114
Query 285 AGTGTTCGAATACTTTCTGTGGCAATTCTGAG 316
| | ||| || |||||| ||| |||||||||
Sbjct 3113 AATTTTC-AACACTTTCCGTGAGAATTCTGAG 3083
>seq2536
Length=66406
Score = 78.8 bits (86), Expect = 2e-11
Identities = 60/71 (85%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 751 ACATATGTCAATGGCGCAAAGGGTACCCGTACGACCGACTCCTGCATCGCCATGCACGAC 810
|||||||| || ||||||| |||| ||| ||||| || ||||||| ||||||||||||
Sbjct 62539 ACATATGTACATTGCGCAAAAAGTACACGTGCGACCAACACCTGCATTGCCATGCACGAC 62480
Query 811 GATTGGACCCA 821
||||||||||
Sbjct 62479 AATTGGACCCA 62469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8170559544364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |