Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008939.1
Length=3008
Score E
Sequences producing significant alignments: (Bits) Value
seq9855 129 1e-26
seq6422 127 4e-26
seq2447 98.7 2e-17
>seq9855
Length=15086
Score = 129 bits (142), Expect = 1e-26
Identities = 203/278 (73%), Gaps = 26/278 (9%)
Strand=Plus/Plus
Query 64 AGACGAACCCAACGAGCCCTTG----ACCATGGCAAAATTCCTAATAGAAGTTCCCGGAT 119
||||||| |||||| | || || |||| ||||| ||| | ||||| |||| ||
Sbjct 2963 AGACGAATCCAACGGGTCCATGGTCGACCA----AAAATGGCTACTGGAAGTCCCCG-AT 3017
Query 120 AGCGAAT--GTGGCGGGTGTGGC-GGCCAAATCCTATCCCACCTTAGCTTATGTT----T 172
| ||| |||||||||||||| | ||| ||| ||| ||||| |||||||| | |
Sbjct 3018 TGGAAATTGGTGGCGGGTGTGGCAGCCCAGATC--ATCACACCTCAGCTTATGCTATACT 3075
Query 173 ATA---CCATAT-ACTTTCA-TAGCTATGTTC-ATAGCTATATATTCCTATTCACATAGC 226
||| ||||| ||||| | | |||||| | ||||| ||| ||| ||| | ||||
Sbjct 3076 ATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTA-GCTGTTAGC 3134
Query 227 TATCatatttatactatatttacctctttaagataaatatttttattaaaagagttatat 286
| || | ||| |||| | ||||||||||||||| ||| |||| ||||||||| ||
Sbjct 3135 TTACA-CTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACAT 3193
Query 287 ataaaataCCACAGCCACAAGAATTTATATAAATCTAT 324
|||||||||||||||||| ||| | ||||| | ||||
Sbjct 3194 ATAAAATACCACAGCCACGGGAAATAATATAGAGCTAT 3231
>seq6422
Length=30189
Score = 127 bits (140), Expect = 4e-26
Identities = 204/279 (73%), Gaps = 28/279 (10%)
Strand=Plus/Plus
Query 64 AGACGAACCCAACGAGCCCTTG----ACCATGGCAAAATTCCTAATAGAAGTTCCCGGAT 119
||||||| |||||| | || || |||| ||||| ||| | ||||| |||| ||
Sbjct 20947 AGACGAATCCAACGGGTCCATGGTCGACCA----AAAATGGCTACTGGAAGTCCCCG-AT 21001
Query 120 AGCGAAT--GTGGCGGGTGTGGC-GGCCAAATCCTATCCCACCTTAGCTTATGTT----T 172
| ||| |||||||||||||| | ||| ||| ||| ||||| |||||||| | |
Sbjct 21002 TGGAAATTGGTGGCGGGTGTGGCAGCCCAGATC--ATCTCACCTCAGCTTATGCTATACT 21059
Query 173 ATA---CCATAT-ACTTTCA-TAGCTATGTTC-ATAGCTATATATTCCTATTCACATAGC 226
||| ||||| ||||| | | |||||| | ||||| ||| ||| ||| | ||||
Sbjct 21060 ATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTA-GCTGTTAGC 21118
Query 227 TATCata-tttatactatatttacctctttaagataaatatttttattaaaagagttata 285
| ||| | ||| |||| | ||||||||||||||| ||| |||| ||||||||| |
Sbjct 21119 --TTATACTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACA 21176
Query 286 tataaaataCCACAGCCACAAGAATTTATATAAATCTAT 324
||||||||||||||||||| ||| | ||||| | ||||
Sbjct 21177 TATAAAATACCACAGCCACGGGAAATAATATAGAGCTAT 21215
>seq2447
Length=64305
Score = 98.7 bits (108), Expect = 2e-17
Identities = 104/135 (77%), Gaps = 3/135 (2%)
Strand=Plus/Minus
Query 206 ATATATTCCTATTCACATAGCTA-TCatatttatactatatttacctctttaagataaat 264
||| ||| ||| | ||||||| | ||||| |||| | ||||||||||||||| ||
Sbjct 3275 ATACATTTCTAACTATATAGCTAGTTCTATTTC--CTATTTATACCTCTTTAAGATATAT 3218
Query 265 atttttattaaaagagttatatataaaataCCACAGCCACAAGAATTTATATAAATCTAT 324
| ||||| |||||||| ||||||| |||||||||||||||| | |||| | ||||
Sbjct 3217 AAACTTATTTAAAGAGTTTGATATAAATAACCACAGCCACAAGAAATCGTATAGAGCTAT 3158
Query 325 AGCAATTTCAGAATA 339
||||| | ||||||
Sbjct 3157 AGCAAATCTAGAATA 3143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 9510915276945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |