Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008947.1
Length=2755
Score E
Sequences producing significant alignments: (Bits) Value
seq3364 389 7e-105
>seq3364
Length=54413
Score = 389 bits (430), Expect = 7e-105
Identities = 407/534 (76%), Gaps = 42/534 (8%)
Strand=Plus/Plus
Query 993 GCGCTTATAAGTATCATCACACTCTAGTACTCCTGTTGAAAAAATAACTTGGATTCTAGC 1052
|| |||||| |||||||| |||| ||||||||||||| ||||| ||||| ||| ||||
Sbjct 46678 GCACTTATAGGTATCATCCCACTTTAGTACTCCTGTTTGAAAAAGAACTTCAATTATAGC 46737
Query 1053 ACTAGTGGGTCTTGTATGAATGCCCGCTATGAATGCTGCGCCGTAGTCCAGCGTCATGCT 1112
|||||||| |||||| || |||||||||||||||| |||| | ||||||||||||||||
Sbjct 46738 ACTAGTGGATCTTGT--GAGTGCCCGCTATGAATGCAGCGCTGCAGTCCAGCGTCATGCT 46795
Query 1113 CACATAATGCAAACGCAGATAAAGCGCTGTATATGGCCTACGAGATGCGGGTGACCGCTG 1172
||||| ||||||| | | |||||| ||||| |||||| |||||||||||||||||||
Sbjct 46796 CACATTATGCAAAAGTGGC-AAAGCGGTGTAT--GGCCTATGAGATGCGGGTGACCGCTG 46852
Query 1173 CATGTCAACGATAAGCAGATGATTCTACAAGAAGTATGTTTGCTCTAACCGTTTCAAATG 1232
|||| |||| | ||||||| |||||||||||| |||||||| |||| |||| | |
Sbjct 46853 CATGGCAACAA--AGCAGATAATTCTACAAGAATTATGTTTGTTCTAGGCGTTCTAGGTA 46910
Query 1233 TCATTCTCTTTCTGTGAGAACGTGAGCTGTAGGTTTCTGATCATTCGGTCCCAGCTCGGA 1292
|| |||| |||||||||||||||||||||||||| ||||| ||||||| |||
Sbjct 46911 TCGTTCT------GTGAGAACGTGAGCTGTAGGTTTCTGGCAATTCGCCCCCAGCTTGGA 46964
Query 1293 TGCTGATGCTGCGGCCCTAGCCATGAAAGTTCCCTGCTGGGTTTGGAACCATATGTTAAT 1352
||||||||||||||||| ||| || | || | ||| || || |||| |
Sbjct 46965 TGCTGATGCTGCGGCCCCAGCAATTCATATTGCTTGC-----TTTGACCCAT------AC 47013
Query 1353 TCATCGCATCTTCAAGGGGGCACATACAAAACAAGTAGATATTTTTTAAAATGCAT---- 1408
|||| || || ||| ||||||||||||| | || | ||||| ||||||||
Sbjct 47014 TCATATCACTTTAGAGGCGGCACATACAAAATAGGTCAAAATTTTCGGAAATGCATCTGA 47073
Query 1409 -----------TATAATATCTTCATCAGCGAATACGAAAATATCATCCTTGGGTTGCCTA 1457
|||| |||||||||| | ||||||||||| | ||||| || ||||
Sbjct 47074 CCCCTATGCACTATAGAATCTTCATCACTGGATACGAAAATAGTACCCTTGCCTTACCTA 47133
Query 1458 GACGCTTAATTTCAAAGTTATTATAGTCCATACGCTATCGTGTCACTGACTGTA 1511
|| ||||||||| ||| |||||| || ||||||| ||||||| ||||||||
Sbjct 47134 GATGCTTAATTTTGAAG---TTATAGACCGTACGCTACCGTGTCATTGACTGTA 47184
Score = 87.8 bits (96), Expect = 3e-14
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 540 AATAGGAATGCTGGACACTCATCGTGAAAAACAGTTCAAAAGTTTGTACATTCAGTATAC 599
|||| ||||| || || ||| | ||||| |||||||||||||||||| || |||||||
Sbjct 46340 AATATAAATGCCGGGCATTCACAGGGAAAAGCAGTTCAAAAGTTTGTACCTTTAGTATAC 46399
Query 600 AGGTAAAACATATCTATT 617
|||||||||||| |||||
Sbjct 46400 AGGTAAAACATACCTATT 46417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8704813046286
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |