Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008968.1
Length=3868
Score E
Sequences producing significant alignments: (Bits) Value
seq9546 273 5e-70
seq1693 273 5e-70
>seq9546
Length=16069
Score = 273 bits (302), Expect = 5e-70
Identities = 243/300 (81%), Gaps = 18/300 (6%)
Strand=Plus/Plus
Query 2952 TAAGGCTGCAAGCGAAGTTGCTAAACGTGTTCAGAGCCTACGAAGATCGTGTCGATTGCA 3011
||||||| ||||| |||| || ||||||||||||||||||||||||||||||||| |||
Sbjct 12946 TAAGGCTTCAAGCAAAGTGGC--AACGTGTTCAGAGCCTACGAAGATCGTGTCGATAGCA 13003
Query 3012 TCTCCTACCTACTTTTTATATGTTAGACAACTTATCTATATGTTGT-TGCNNNNNNNNNN 3070
||||||| ||| |||| ||||| || || |||| |||||||| |||
Sbjct 13004 TCTCCTATCTATTTTTAATATGGTAACCAGCTTA-CTATATGTCCCATGC---------- 13052
Query 3071 TAATGGATACAAACCCACTGGAACTGCAATCGCCAGAGCCGTTTGCCAGGGTTTCAATAC 3130
||| |||||||||||||||| ||||| ||||||||||| | | ||||||||||||| |
Sbjct 13053 -AATTGATACAAACCCACTGGCACTGCGATCGCCAGAGCTGCCTTCCAGGGTTTCAATCC 13111
Query 3131 CTATTGAACAATTATGCTCTATCAGTAGGGTTAGAGTAAGAAAATGCAGAGATTATCATT 3190
||||||| ||| || ||||| | | | || ||||| |||||| |||||||||||||||
Sbjct 13112 CTATTGAGAAATCATACTCTA-CGGGAAGGCAAGAGTGAGAAAAAGCAGAGATTATCATT 13170
Query 3191 TATCCATTTATTGATCTTTAAAACTGACAGTAGTAGGCGAGTATGTTGATATGTTAGGCG 3250
||| ||||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct 13171 TATAAATTTATTGATCTTTAAAACCGACAGTAGTAGGCGAGTA--TAAGTATGTTAGGCG 13228
Score = 262 bits (290), Expect = 1e-66
Identities = 275/358 (77%), Gaps = 35/358 (10%)
Strand=Plus/Plus
Query 1194 AACGGTCAGCATCCATCAGTACCGAGCGAAAGAATGCATAAAGGT----------AGTCA 1243
||| |||||||||||||||||||||||||||||| |||| |||| || ||
Sbjct 12523 AACAGTCAGCATCCATCAGTACCGAGCGAAAGAACGCATCAAGGGGAAAGACTCAAGCCA 12582
Query 1244 TTGAAAGACTCAAGCCGAACAGGTAGTTATGCATCGCCTCCGTCTGGACTGCAGAGTCCA 1303
| ||||||||| || |||||||| ||||||| |||||| ||| || | ||||| |
Sbjct 12583 TAGAAAGACTCGAGTGGAACAGGTGGTTATGCCCTGCCTCCTTCTAGATTTCAGAGCCTC 12642
Query 1304 ATACATTACGGACTTTA---TAT---CACTAAAGT----------GCATC----AGTACC 1343
||||||||| |||||| ||| || ||| | ||||| ||||||
Sbjct 12643 ATACATTACAGACTTTGCGGTATGTGCATAAAAATCTAACGGTCAGCATCTATCAGTACC 12702
Query 1344 GAACCAATGAATGCGTCAAGGTAAACATT-AGATACTTGAGCCAATCAGGTGGTTACGCC 1402
||||||| |||||| ||||| ||| |||| | | |||| |||||| |||||| ||| |||
Sbjct 12703 GAACCAAAGAATGCATCAAGATAAGCATTGACAGACTTAAGCCAAACAGGTGCTTATGCC 12762
Query 1403 CCGCCCCTCTTCCTTTCCTTATCAGCGTGGAGTGGAGGGGATAAAGCATTTGTTTACTTT 1462
| |||||| |||| | |||||||| ||||||||||||||||| || ||||||||||||
Sbjct 12763 C-GCCCCT--TCCTCTTCTTATCAGAGTGGAGTGGAGGGGATAG-GCCTTTGTTTACTTT 12818
Query 1463 AACAAATCTACACTGTTTTAAGTCTAGCGTGTAGCAACCAGACCCTGTTCTAACGCTA 1520
| ||||||||| |||| ||||||||||| ||||||||||| |||||| ||||||||
Sbjct 12819 AGCAAATCTACTCTGTGTTAAGTCTAGCCTGTAGCAACCATACCCTGCGTTAACGCTA 12876
Score = 210 bits (232), Expect = 5e-51
Identities = 162/190 (85%), Gaps = 3/190 (2%)
Strand=Plus/Plus
Query 2751 TAAGGCTGCAAGCGAAGTTGCAAAACGTGTTCAGAGCCTACGAAGATCGTGTCGATTGCA 2810
||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| |||
Sbjct 12946 TAAGGCTTCAAGCAAAGTGGCAA--CGTGTTCAGAGCCTACGAAGATCGTGTCGATAGCA 13003
Query 2811 TCTCCTACCTACTTTTTATATGTTAGACGACTTATCTATATGTTTCATACAATTGATACA 2870
||||||| ||| |||| ||||| || | |||| |||||||| ||| |||||||||||
Sbjct 13004 TCTCCTATCTATTTTTAATATGGTAACCAGCTTA-CTATATGTCCCATGCAATTGATACA 13062
Query 2871 AACCCACTGGAACTGCAATCGTCAGAGCTGGTTGCCGGGGTTTCAATACCTATTGAAAAA 2930
|||||||||| ||||| |||| |||||||| | || |||||||||| |||||||| |||
Sbjct 13063 AACCCACTGGCACTGCGATCGCCAGAGCTGCCTTCCAGGGTTTCAATCCCTATTGAGAAA 13122
Query 2931 TCATGCTCTA 2940
|||| |||||
Sbjct 13123 TCATACTCTA 13132
Score = 150 bits (166), Expect = 4e-33
Identities = 167/219 (76%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 3334 CTTATTGATTGCGATGGTGGAAGAAGTCCAACACTTATTTTCTGAACCACGCTCTCGCGG 3393
|| || ||||| || ||||||| |||| |||||||||||||||||| ||||||||||||
Sbjct 11307 CTGATGGATTGGGACGGTGGAAAAAGTTCAACACTTATTTTCTGAAGAACGCTCTCGCGG 11366
Query 3394 CTGCGGCCGCGACAGCTACCCCCGCCGCGTTTCGAGCCCGATCTGCTTGCT--TTCGAGA 3451
|||| ||| | || |||||| ||||| | || |||||| ||||| ||| ||| ||
Sbjct 11367 CTGCAGCCACCACTGCTACCACCGCCCCTGTTTGAGCCCACTCTGC--GCTTCTTCCAGC 11424
Query 3452 TTCCTCGGCCGCTCGCTGGGCTGCCTCGGCTAGTG--CCTTAGCTCTTTCTTCCCGTTGG 3509
||| ||||| ||||| ||||||||| | | || | || |||||||| | |
Sbjct 11425 TTCATCGGCATGTCGCTTGGCTGCCTC--CAAATGGTTCGCAGTTCTTTCTTTCTGCCTT 11482
Query 3510 CGACATTCGGCCGCATATTTCTGCACTTTTTCTTCTTGT 3548
|||||| | | ||||||| |||| ||||||||||||||
Sbjct 11483 CGACATGCAGTGGCATATTCCTGCGCTTTTTCTTCTTGT 11521
Score = 107 bits (118), Expect = 5e-20
Identities = 85/102 (83%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1518 CTATTTACTTTTCATATGTTAACTAACTTACCATATGTTTCATGCAATTGATACAAACCT 1577
|||| || |||| ||||| |||| | ||||| |||||| |||||||||||||||||||
Sbjct 13008 CTATCTATTTTTAATATGGTAACCAGCTTACTATATGTCCCATGCAATTGATACAAACCC 13067
Query 1578 ACTGGAACTGCAATCGCCAGAGTTGGTTGCCAGAGTTTCAAT 1619
||||| ||||| |||||||||| || | |||| ||||||||
Sbjct 13068 ACTGGCACTGCGATCGCCAGAGCTGCCTTCCAGGGTTTCAAT 13109
Score = 95.1 bits (104), Expect = 3e-16
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 1194 AACGGTCAGCATCCATCAGTACCGAGCGAAAGAATGCATAAAGGTAGTCATTGAAAGACT 1253
||||||||||||| ||||||||||| | ||||||||||| ||| || |||||| |||||
Sbjct 12680 AACGGTCAGCATCTATCAGTACCGAACCAAAGAATGCATCAAGATAAGCATTGACAGACT 12739
Query 1254 CAAGCCGAACAGGTAGTTATGC 1275
||||| ||||||| ||||||
Sbjct 12740 TAAGCCAAACAGGTGCTTATGC 12761
>seq1693
Length=102259
Score = 273 bits (302), Expect = 5e-70
Identities = 243/300 (81%), Gaps = 18/300 (6%)
Strand=Plus/Plus
Query 2952 TAAGGCTGCAAGCGAAGTTGCTAAACGTGTTCAGAGCCTACGAAGATCGTGTCGATTGCA 3011
||||||| ||||| |||| || ||||||||||||||||||||||||||||||||| |||
Sbjct 88116 TAAGGCTTCAAGCAAAGTGGC--AACGTGTTCAGAGCCTACGAAGATCGTGTCGATAGCA 88173
Query 3012 TCTCCTACCTACTTTTTATATGTTAGACAACTTATCTATATGTTGT-TGCNNNNNNNNNN 3070
||||||| ||| |||| ||||| || || |||| |||||||| |||
Sbjct 88174 TCTCCTATCTATTTTTAATATGGTAACCAGCTTA-CTATATGTCCCATGC---------- 88222
Query 3071 TAATGGATACAAACCCACTGGAACTGCAATCGCCAGAGCCGTTTGCCAGGGTTTCAATAC 3130
||| |||||||||||||||| ||||| ||||||||||| | | ||||||||||||| |
Sbjct 88223 -AATTGATACAAACCCACTGGCACTGCGATCGCCAGAGCTGCCTTCCAGGGTTTCAATCC 88281
Query 3131 CTATTGAACAATTATGCTCTATCAGTAGGGTTAGAGTAAGAAAATGCAGAGATTATCATT 3190
||||||| ||| || ||||| | | | || ||||| |||||| |||||||||||||||
Sbjct 88282 CTATTGAGAAATCATACTCTA-CGGGAAGGCAAGAGTGAGAAAAAGCAGAGATTATCATT 88340
Query 3191 TATCCATTTATTGATCTTTAAAACTGACAGTAGTAGGCGAGTATGTTGATATGTTAGGCG 3250
||| ||||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct 88341 TATAAATTTATTGATCTTTAAAACCGACAGTAGTAGGCGAGTA--TAAGTATGTTAGGCG 88398
Score = 262 bits (290), Expect = 1e-66
Identities = 275/358 (77%), Gaps = 35/358 (10%)
Strand=Plus/Plus
Query 1194 AACGGTCAGCATCCATCAGTACCGAGCGAAAGAATGCATAAAGGT----------AGTCA 1243
||| |||||||||||||||||||||||||||||| |||| |||| || ||
Sbjct 87693 AACAGTCAGCATCCATCAGTACCGAGCGAAAGAACGCATCAAGGGGAAAGACTCAAGCCA 87752
Query 1244 TTGAAAGACTCAAGCCGAACAGGTAGTTATGCATCGCCTCCGTCTGGACTGCAGAGTCCA 1303
| ||||||||| || |||||||| ||||||| |||||| ||| || | ||||| |
Sbjct 87753 TAGAAAGACTCGAGTGGAACAGGTGGTTATGCCCTGCCTCCTTCTAGATTTCAGAGCCTC 87812
Query 1304 ATACATTACGGACTTTA---TAT---CACTAAAGT----------GCATC----AGTACC 1343
||||||||| |||||| ||| || ||| | ||||| ||||||
Sbjct 87813 ATACATTACAGACTTTGCGGTATGTGCATAAAAATCTAACGGTCAGCATCTATCAGTACC 87872
Query 1344 GAACCAATGAATGCGTCAAGGTAAACATT-AGATACTTGAGCCAATCAGGTGGTTACGCC 1402
||||||| |||||| ||||| ||| |||| | | |||| |||||| |||||| ||| |||
Sbjct 87873 GAACCAAAGAATGCATCAAGATAAGCATTGACAGACTTAAGCCAAACAGGTGCTTATGCC 87932
Query 1403 CCGCCCCTCTTCCTTTCCTTATCAGCGTGGAGTGGAGGGGATAAAGCATTTGTTTACTTT 1462
| |||||| |||| | |||||||| ||||||||||||||||| || ||||||||||||
Sbjct 87933 C-GCCCCT--TCCTCTTCTTATCAGAGTGGAGTGGAGGGGATAG-GCCTTTGTTTACTTT 87988
Query 1463 AACAAATCTACACTGTTTTAAGTCTAGCGTGTAGCAACCAGACCCTGTTCTAACGCTA 1520
| ||||||||| |||| ||||||||||| ||||||||||| |||||| ||||||||
Sbjct 87989 AGCAAATCTACTCTGTGTTAAGTCTAGCCTGTAGCAACCATACCCTGCGTTAACGCTA 88046
Score = 210 bits (232), Expect = 5e-51
Identities = 162/190 (85%), Gaps = 3/190 (2%)
Strand=Plus/Plus
Query 2751 TAAGGCTGCAAGCGAAGTTGCAAAACGTGTTCAGAGCCTACGAAGATCGTGTCGATTGCA 2810
||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| |||
Sbjct 88116 TAAGGCTTCAAGCAAAGTGGCAA--CGTGTTCAGAGCCTACGAAGATCGTGTCGATAGCA 88173
Query 2811 TCTCCTACCTACTTTTTATATGTTAGACGACTTATCTATATGTTTCATACAATTGATACA 2870
||||||| ||| |||| ||||| || | |||| |||||||| ||| |||||||||||
Sbjct 88174 TCTCCTATCTATTTTTAATATGGTAACCAGCTTA-CTATATGTCCCATGCAATTGATACA 88232
Query 2871 AACCCACTGGAACTGCAATCGTCAGAGCTGGTTGCCGGGGTTTCAATACCTATTGAAAAA 2930
|||||||||| ||||| |||| |||||||| | || |||||||||| |||||||| |||
Sbjct 88233 AACCCACTGGCACTGCGATCGCCAGAGCTGCCTTCCAGGGTTTCAATCCCTATTGAGAAA 88292
Query 2931 TCATGCTCTA 2940
|||| |||||
Sbjct 88293 TCATACTCTA 88302
Score = 107 bits (118), Expect = 5e-20
Identities = 85/102 (83%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1518 CTATTTACTTTTCATATGTTAACTAACTTACCATATGTTTCATGCAATTGATACAAACCT 1577
|||| || |||| ||||| |||| | ||||| |||||| |||||||||||||||||||
Sbjct 88178 CTATCTATTTTTAATATGGTAACCAGCTTACTATATGTCCCATGCAATTGATACAAACCC 88237
Query 1578 ACTGGAACTGCAATCGCCAGAGTTGGTTGCCAGAGTTTCAAT 1619
||||| ||||| |||||||||| || | |||| ||||||||
Sbjct 88238 ACTGGCACTGCGATCGCCAGAGCTGCCTTCCAGGGTTTCAAT 88279
Score = 95.1 bits (104), Expect = 3e-16
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 1194 AACGGTCAGCATCCATCAGTACCGAGCGAAAGAATGCATAAAGGTAGTCATTGAAAGACT 1253
||||||||||||| ||||||||||| | ||||||||||| ||| || |||||| |||||
Sbjct 87850 AACGGTCAGCATCTATCAGTACCGAACCAAAGAATGCATCAAGATAAGCATTGACAGACT 87909
Query 1254 CAAGCCGAACAGGTAGTTATGC 1275
||||| ||||||| ||||||
Sbjct 87910 TAAGCCAAACAGGTGCTTATGC 87931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12262138666845
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