Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008973.1
Length=4180
Score E
Sequences producing significant alignments: (Bits) Value
seq3364 551 1e-153
>seq3364
Length=54413
Score = 551 bits (610), Expect = 1e-153
Identities = 462/563 (82%), Gaps = 10/563 (2%)
Strand=Plus/Minus
Query 952 ATACAGTCAGTGACATGAGAGCGTATGGTCCATAACTTTAAAATTAAGCATCTAGGCAAG 1011
||||||||| ||||| | |||||| |||| ||||||| ||||||||||||||||| |||
Sbjct 47185 ATACAGTCAATGACACGGTAGCGTACGGTCTATAACTTCAAAATTAAGCATCTAGGTAAG 47126
Query 1012 GCAAGGGTGATGTATTCGTATTCAGTGATGACGATATTATAGTGCATAGAGGTCAGATGC 1071
|||||||| | | ||||||| ||||||||| ||| |||||||||||| ||||||||||
Sbjct 47125 GCAAGGGTACTATTTTCGTATCCAGTGATGAAGATTCTATAGTGCATAGGGGTCAGATGC 47066
Query 1072 ATTTGCAAAAATTTCTACCTGTTTTGCATGTGACACCTTGAAGGTGCTATGAATATGAGT 1131
|||| | ||||||| |||| ||||| ||||| | ||| || ||| ||||| |||| ||
Sbjct 47065 ATTTCCGAAAATTTTGACCTATTTTGTATGTGCCGCCTCTAAAGTGATATGAGTATGGGT 47006
Query 1132 AAAAGCAGCAGGTAACGTGAACTGCTAACGGCCGTGGCATCAGCGTCCAAGCTGGGGACG 1191
|||||| | || |||| |||| ||||| |||||||| |||||||||||| ||
Sbjct 47005 CAAAGCAA---GCAATATGAATTGCTGG-GGCCGCAGCATCAGCATCCAAGCTGGGGGCG 46950
Query 1192 AATTATCAGAAATCTACAGCTCACGTTTTCACGGAATGACACTTAGAACGCCTAGAACAA 1251
|||| |||||| |||||||||||||| |||| ||| || || |||||||||||||||||
Sbjct 46949 AATTGCCAGAAACCTACAGCTCACGTTCTCACAGAACGATACCTAGAACGCCTAGAACAA 46890
Query 1252 ACAGACTTCTTGTAGAATTATCTGCTTATCGTTGGCATGCAGCAGTCACCTGCATCTCGT 1311
||| | ||||||||||||||||||||| |||| |||||||| |||||| ||||||| |
Sbjct 46889 ACATAATTCTTGTAGAATTATCTGCTTT--GTTGCCATGCAGCGGTCACCCGCATCTCAT 46832
Query 1312 AGGCCATACAGCGCTTCACCACTTTTGCATAATGTAAGCATGACGTTGGACTGCAGCGGA 1371
|||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||
Sbjct 46831 AGGCCATACACCGCTTTGCCACTTTTGCATAATGTGAGCATGACGCTGGACTGCAGCGCT 46772
Query 1372 GCATTCACAACAGGCACTCACAAGACCCACTACTCCTAGATTTGAAGTTATTTTTACAAC 1431
||||||| | | ||||||||||||| |||||| | ||| | |||||||| ||||| |||
Sbjct 46771 GCATTCATAGCGGGCACTCACAAGATCCACTAGTGCTATAATTGAAGTTCTTTTTCAAAC 46712
Query 1432 AGAGGTACTAAAGCGTGATGATACCTATAAGCGCAGAGAGCACCTAAACATCGGCTGGCT 1491
|| ||||||||| | ||||||||||||||| || | | | ||||| ||| ||||
Sbjct 46711 AGGAGTACTAAAGTGGGATGATACCTATAAGTGCGACGTGTATCTAAATATC----GGCT 46656
Query 1492 GACGTGGTCGTAGCATTGTTTTT 1514
||||||||| ||||||| ||||
Sbjct 46655 GACGTGGTCTCAGCATTGCTTTT 46633
Score = 86.0 bits (94), Expect = 2e-13
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 3343 TACGTGCTTAATAGTTATGCTTTACCTGTGTACTAAAGGTACAAACTTTTGAACAAGTTT 3402
|| ||||||||||| |||| ||||||||| |||||||||||||||||||||||| |||
Sbjct 46426 TATGTGCTTAATAGGTATGTTTTACCTGTATACTAAAGGTACAAACTTTTGAACTGCTTT 46367
Query 3403 TCACGATGAGTGTCCAACATTCCTATT 3429
|| | ||| || || |||| ||||
Sbjct 46366 TCCCTGTGAATGCCCGGCATTTATATT 46340
Score = 77.0 bits (84), Expect = 9e-11
Identities = 93/127 (73%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 3203 GCTTCCTTGACATGCAGCAGTTACCCGCGTTTGGTAGGCCATACACAACTTTTCTACGTA 3262
|||| ||| |||||||| || |||||| | | |||||||||||| |||| | || |
Sbjct 46866 GCTTTGTTGCCATGCAGCGGTCACCCGCATCTCATAGGCCATACACCGCTTTGCCACTTT 46807
Query 3263 TACATAATGTAAGCACAACGCCAAACTGCAGTGCAGTACAAGTAGCGGATACTAACAACA 3322
| |||||||| |||| |||| ||||||| || | | |||||| ||| |||| |
Sbjct 46806 TGCATAATGTGAGCATGACGCTGGACTGCAGCGCTGCATTCATAGCGGGCACTCACAAGA 46747
Query 3323 GCCACTA 3329
||||||
Sbjct 46746 TCCACTA 46740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13260256919925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |