Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008986.1 Length=5047 Score E Sequences producing significant alignments: (Bits) Value seq3364 576 4e-161 >seq3364 Length=54413 Score = 576 bits (638), Expect = 4e-161 Identities = 594/781 (76%), Gaps = 46/781 (6%) Strand=Plus/Plus Query 97 CGACATTGTGTGCGCGATAAGA--------------CGACAACGATGTAGATCGAATGCA 142 || ||||||||||||||||||| |||||| |||| |||||| ||||| Sbjct 46427 CGGCATTGTGTGCGCGATAAGAGCGTGTCTTAACAACGACAATGATGCAGATCGGATGCA 46486 Query 143 GTACTAGCTAGTTAAAACTACCGGTATGCGATCTTTGACCGAGAACTGATAACATAGAAT 202 || ||| | | |||| || ||||| || |||||||| |||||||||| |||| Sbjct 46487 GTTTTAGTAGGGTGAAACAACTAGTATGTGACTCTTGACCGAATACTGATAACACAGAAG 46546 Query 203 ATATAAACAAAATTGATTACAAA-----Caaaa----aaaCCATTCGGTTACCGAACGAC 253 ||||||||||||| || | | ||||| |||| || ||||| || |||| Sbjct 46547 ATATAAACAAAATAGACTTGAGTTTTCCCAAAACGAGAAACTGTTAGGTTATCGGGCGAC 46606 Query 254 TTTGAGATAAGCAAGTGACGTAGAAAGTCTAACACGTGTGAAAACAATGGTATGATCATG 313 || | |||||| || | |||| ||||| ||| ||||| | || || | Sbjct 46607 TTAGTGATAAGGAATT-------------TAACTCGTGTAAAAGCAATGCTGAGACCACG 46653 Query 314 TCACCGCATGTTTAGGTGCACGCTGTGCTTATAGGTATCATCATACTACTTTAGTACTCC 373 ||| | || ||||| | |||| | ||||||||||||||| | ||||||||||||| Sbjct 46654 TCAGCCGATATTTAGATACACGTCGCACTTATAGGTATCATC---CCACTTTAGTACTCC 46710 Query 374 TGTTGGAAAAATAACTTCAATTCTAGCTGTAGTGGCTCTTACGAGTGCCCGCTATGAACG 433 |||| |||||| |||||||||| |||| |||||| |||| |||||||||||||||| | Sbjct 46711 TGTTTGAAAAAGAACTTCAATTATAGCACTAGTGGATCTTGTGAGTGCCCGCTATGAATG 46770 Query 434 GTGCGCTGCAGTCAAACGCCATGCTTTTATTATGCAAAGGTTGCAAGGCGGTGTATGGCC 493 ||||||||||| | || |||||| |||||||||| || |||| ||||||||||||| Sbjct 46771 CAGCGCTGCAGTCCAGCGTCATGCTCACATTATGCAAAAGTGGCAAAGCGGTGTATGGCC 46830 Query 494 AACGAGATGCGGCTGACCGCTGCATGTCAACAATTGAAGCAGAGCATTCTACATGAAGTA 553 | ||||||||| ||||||||||||| |||||| |||||| |||||||| ||| || Sbjct 46831 TATGAGATGCGGGTGACCGCTGCATGGCAACAA----AGCAGATAATTCTACAAGAATTA 46886 Query 554 TGTTCGTTCTAGACGTACTAAGTATCGTTCAGTGGTAATATGAGCTGTAGGTTTCCGATA 613 |||| ||||||| ||| ||| ||||||||| ||| || ||||||||||||||| | | Sbjct 46887 TGTTTGTTCTAGGCGTTCTAGGTATCGTTCTGTGAGAACGTGAGCTGTAGGTTTCTGGCA 46946 Query 614 ATTCAGCTTCAGCTTGGATGCTGATAGTACGGCCTTACCAATTCGTGTTACCAGCTGCTT 673 |||| | |||||||||||||||| | ||||| | |||||| | || | ||||| Sbjct 46947 ATTCGCCCCCAGCTTGGATGCTGATGCTGCGGCCCCAGCAATTCATATTGCT---TGCTT 47003 Query 674 TTACCCATATTCATAGCACCTTCAAGCCGGCACATCCAAAACAGGTCAAAATTTTCGAAA 733 | ||||||| ||||| ||| || || |||||||| ||||| ||||||||||||||| || Sbjct 47004 TGACCCATACTCATATCACTTTAGAGGCGGCACATACAAAATAGGTCAAAATTTTCGGAA 47063 Query 734 ATCCATCTGACCACTATGCATTATAGTATCTTCATCACTGAATCCGAAAATATAACACTT 793 || ||||||||| ||||||| ||||| ||||||||||||| || |||||||| || ||| Sbjct 47064 ATGCATCTGACCCCTATGCACTATAGAATCTTCATCACTGGATACGAAAATAGTACCCTT 47123 Query 794 GGACTGACTAAATGCTTAACTTTGAAGCTATAGACCGTACGCTAATGTGTCACTGACTGT 853 | | ||| |||||||| ||||||| |||||||||||||||| |||||| ||||||| Sbjct 47124 GCCTTACCTAGATGCTTAATTTTGAAGTTATAGACCGTACGCTACCGTGTCATTGACTGT 47183 Query 854 A 854 | Sbjct 47184 A 47184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16033873988580