Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq955 262 7e-65
seq137 147 4e-30
>seq955
Length=106330
Score = 262 bits (290), Expect = 7e-65
Identities = 697/1051 (66%), Gaps = 43/1051 (4%)
Strand=Plus/Minus
Query 244460 GGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTG 244519
||||| | ||||| | ||| | ||||||| ||| || || ||||| ||||| || |
Sbjct 59640 GGGATACGCATCAGGACGAAAGCATCGGCCAATCCTTGAACACCGATTCCGATCGGCCGA 59581
Query 244520 TGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTG 244579
|| ||| |||| ||| | ||||||| || | ||||| ||||| | || || | |||
Sbjct 59580 TGCCGCATGTTTGAGTTCTTGGCTTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTG 59521
Query 244580 TTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAG 244639
|| || || | || || ||| || ||| || ||||| ||| | |
Sbjct 59520 TTTAGATTCTGCACGACGATTTTAGTGACTTCTTTTAGCTTCTCAAAGTTATACGTTTTG 59461
Query 244640 GGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAG 244699
||| | | ||| | || ||| || |||||| |||| || ||
Sbjct 59460 TCATCATTGACGA--------------ATCT-GTTCAGTGCGACGGACGCCAAATTACAC 59416
Query 244700 ACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTG 244759
||||| || || |||| ||||||| || ||||| |||||||| |||||||| |||
Sbjct 59415 ACGGCAACTTCATCCGGCGACGTGTACTCAACGATCTCCGTGCAGAGATTACTGCATTTG 59356
Query 244760 ATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAG 244819
|| |||||||||| || |||||| || |||||| ||||| ||||| |||||| |
Sbjct 59355 ATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGTTGCATGCGTCTTTGTAAAGCATGTAT 59296
Query 244820 GGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACC 244879
|| |||||| |||| || || | | || ||||| | | || | ||
Sbjct 59295 GGGGTCCCGGTTTCGACTTGCGCTTCAATGATAGCCTTCCACAAAACTTGCGCTCTCACT 59236
Query 244880 GTCCTGCGAG--CCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGC 244937
||| | | || | || || || || || || | |||||||||| |
Sbjct 59235 TGCCTCACATATCGTTTCTCT-TGT-TCATATCGCTCATATAACTTCTCGAACTCGTCCC 59178
Query 244938 CCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCCG 244996
||||| ||| | |||||||| || | || ||| |||||||| ||||| |||||| |
Sbjct 59177 CCCAGCAGTCGGCCAGGCCGGGACA-GTCGTGGGGGCACATGAGGCTCCATTCGCCGTTG 59119
Query 244997 TCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTC 245056
|| ||| || | |||||| | ||| || |||||||| | | || || || || |
Sbjct 59118 CTCTCGACTCTTTTCATGAACAAGTCTGGTATCCAGAGCCCATAAAAAAGCTCTCTTGCG 59059
Query 245057 CTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGC 245116
| || ||| |||||||| ||| | || ||||| || ||||| | || |||||
Sbjct 59058 CGAACTTCCTCCTTCCCAGTGTTTTTCTTGAGATCCAAGAACTCAAATATATCCGCGTGC 58999
Query 245117 CAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATC 245176
|| ||||| | |||||| |||| ||||||||| || ||||| || || ||||| || |
Sbjct 58998 CACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTCGTTTGTTCCCGCCTTGGTCGACGTAC 58939
Query 245177 CTCTCGAGC-GCGTTGA---AGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTT 245232
|| ||| | |||| ||| ||| || | || || | |||||| ||| ||||||
Sbjct 58938 CT----AGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAGACGCCGTT 58883
Query 245233 GGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG----CCTAGTC 245288
||| || |||||||| |||||| | | || ||| | || || || || | |
Sbjct 58882 GGTTCCGGCGATGTAGGATCCCTTGGCGCGGA---TGCAG-TGTACGTGAACGCCGATAC 58827
Query 245289 CGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGC 245348
|||| || ||||||||||| ||||| |||| ||||| |||||||| ||||
Sbjct 58826 CGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCGATGC 58767
Query 245349 TGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGT 245408
|||| ||||||| || || ||||||||||| |||||||| ||| || ||
Sbjct 58766 TGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTGGGGGCGGGGCGTGGCCGCCG 58707
Query 245409 TGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGG 245467
|||||| |||||||| ||||| || ||||| | ||| || || | |||||| | |
Sbjct 58706 AGAACAGCGTGGGGCTCGCGTGCGTGAAGTA-CTTCTCTGACAGCAGGTTGTACGTGTTG 58648
Query 245468 --AGCAGAGCGTCGATGTTGTCGCCGTGGAT 245496
||| || |||||||| |||||||| ||
Sbjct 58647 ATAGCGGA--GTCGATGTCCTCGCCGTGAAT 58619
>seq137
Length=194913
Score = 147 bits (162), Expect = 4e-30
Identities = 154/197 (78%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668
|| ||||| ||| |||||||| |||| ||| |||||||||||||||||||||||||| |
Sbjct 23595 CTATTCAACGCCGTGGAGACGCTGCCGTGCGTCAAGAAGAAGGCGGACTGGGCGCTCCAG 23536
Query 42669 TGGATCGAGAGTCCCGAC-GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727
||||||| || | ||| || || ||||||||| | | || || || | |||||||
Sbjct 23535 TGGATCGGCAG-CAAGACGGCCACCTTCGGCGAGCGCATCGTGGCATTCGCATCCGTCGA 23477
Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-GA 42786
|||||| |||||||||||| |||||| || || |||||| | ||| | | | ||| ||
Sbjct 23476 GGGCATATTCTTCTCGGGCAGCTTCGCGTCTATATTCTGGATGAAG-AAACGCGGTCTGA 23418
Query 42787 TGCCCGGACTCACCTTC 42803
||||||| || || |||
Sbjct 23417 TGCCCGGTCTGACATTC 23401
Score = 113 bits (124), Expect = 9e-20
Identities = 139/189 (74%), Gaps = 6/189 (3%)
Strand=Plus/Minus
Query 42408 TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTG 42467
||| ||||| || | ||||| |||||||| ||||| || ||||| |||||||||||| ||
Sbjct 27566 TTCATCAAACACGTCCTGGCTTTCTTCGCGGCCTCCGATGGCATTGTCAATGAGAACTTG 27507
Query 42468 GCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAG 42527
| || ||| |||| |||||| | ||| || | |||||||| || ||||||
Sbjct 27506 GTGGAGAGATTCTCTCAAGAAGTGCAGGTCACTGAAGCAAGATGCTTCTATGGATTCCAG 27447
Query 42528 ATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATC 42584
|| || || ||||| || ||||| ||| ||||| | ||||||| | || ||||||
Sbjct 27446 ATTGCAATGGAGAATGTACACTCAGAGATGTACTC---TCTGCTCATCGATACTTACATC 27390
Query 42585 CTGGATCCC 42593
|||||||
Sbjct 27389 AGGGATCCC 27381
Score = 87.8 bits (96), Expect = 3e-12
Identities = 136/194 (70%), Gaps = 3/194 (2%)
Strand=Plus/Minus
Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCT 42888
|||| ||||| | ||||| || ||||| ||||| | || ||| || ||||| |
Sbjct 22227 AGGGTCTGCACACAGACTTCGCTTGCCTGATGTTC---AAACATCTCGTCCAGAAGCCTT 22171
Query 42889 CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCA 42948
| ||| |||| || | | || | | ||| ||||| | || ||| ||||||||||||
Sbjct 22170 CCAAGAAGCGCGTGCTGCAGATAGTGAAGGACGCCGTCGTCATAGAGCAGGAGTTCCTCA 22111
Query 42949 CGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008
| | |||| |||||| ||| | ||||||||| ||| ||||||| | ||||||
Sbjct 22110 CTGACGCGCTCCCCGTGCGGCTGCTGGGCATGAACTGCGAGCTCATGTCGGATTACATCG 22051
Query 43009 AGTACGTCGCCGAC 43022
||| ||| || |||
Sbjct 22050 AGTTCGTGGCGGAC 22037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944034638803760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |