Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq955 233 2e-56 >seq955 Length=106330 Score = 233 bits (258), Expect = 2e-56 Identities = 960/1496 (64%), Gaps = 62/1496 (4%) Strand=Plus/Plus Query 93771 TGGCAGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGG 93830 ||||||| || ||||||| || || || |||||||||| || ||||||| |||||||| Sbjct 58568 TGGCAGG-TTGCCGAGCGTCCCCAGCACATGCTGATGCGAGTTTCCATCGGCATTCACGG 58626 Query 93831 CCACGACATGCCGAAT--GTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACC 93888 | | ||||| ||| | | | | | | || || ||| | ||| ||| | Sbjct 58627 CGAGGACAT--CGACTCCGCTATCAACACGTACA---ACCTGCTGTCAGAGAAGTACTTC 58681 Query 93889 ATG---GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGT 93945 | | || | ||| || |||||| |||| || || || ||| | || || || Sbjct 58682 ACGCACGCGAGCCCCACGCTGTTCTCGGCGGCCACGCCCCGCCCCCAGCTCTCCTCCTGC 58741 Query 93946 TTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGT 94005 ||||| || | | |||| |||| |||| || || | ||||| ||||| | || Sbjct 58742 TTCCTCATCGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTCAAACATTGC 58801 Query 94006 GCGACCATCTCAAAATACGCGGGGGGAATCGG-GATCAGTGTCCACGACGTACGTGCCAG 94064 ||| |||||| |||| ||||| || ||||| | ||| || ||| | | || |||| Sbjct 58802 GCGCTCATCTCCAAATCAGCGGGCGGTATCGGCGTTCAC-GTACACTGCATCCGCGCCAA 58860 Query 94065 GGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGT 94124 ||| ||||||||| ||| ||||| ||| ||||||||||||||| || |||||||| || Sbjct 58861 GGGATCCTACATCGCCGGAACCAACGGCGTCTCCAACGGCCTCGTACCCATGCTCCGCGT 58920 Query 94125 CTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGC 94184 || |||||| | || | ||||| ||||| || || | | || | ||||| Sbjct 58921 CTATAACAACACAGCTAGGTACGTCGACCAAGGCGGGAACAAACGACCCGGCGCCTTCGC 58980 Query 94185 GGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCA 94244 |||||| |||||||| ||||||||||| | | ||| | || || | | | || || Sbjct 58981 GGTCTACCTCGAGCCGTGGCACGCGGATATATTTGAGTTCTTGGATCT-CAAGAAAAACA 59039 Query 94245 C-GGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTT 94303 | || || || | | || ||||| || || || | |||||| | |||||| | | Sbjct 59040 CTGGGAAGGAGGAAGTTCGCGCAAGAGAGCTTTTTTATGGGCTCTGGATACCAGACTTGT 59099 Query 94304 TTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCG 94363 | |||||| | ||||||| ||| || ||||| || | || ||| | || ||||||| Sbjct 59100 TCATGAAAAGAGTCGAGAGCAACGGCGAATGGAGCCTCATGTGCCCCCACGACTGTCCCG 59159 Query 94364 GACTGTCCGAC-GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAG 94422 | ||| ||||| | | | || || | || || | || |||| || || ||| Sbjct 59160 GCCTGGCCGACTGCTGGGGGGACGAG-TTCGAGAAGTTATATGAGCGATATGAA------ 59212 Query 94423 GGCAAGGCCAGGAAGGTTATG-GATGCTAG-GA-AGC--------TGTGGGATCAGATCG 94471 |||| || || | |||| || || || || ||| ||||| | ||| Sbjct 59213 --CAAG---AGAAACGATATGTGAGGCAAGTGAGAGCGCAAGTTTTGTGGAAGGCTATCA 59267 Query 94472 TGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCA 94531 | || | || || || || || || || ||||| | | ||| ||| | |||| | Sbjct 59268 TTGAAGCGCAAGTCGAAACCGGGACCCCATACATGCTTTACAAAGACGCATGCAACAGTA 59327 Query 94532 AGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCG 94591 | ||| || || |||| || ||||| || ||||| ||||| ||||| || | Sbjct 59328 AAAGCAATCAAAAGAACCTGGGCACTATCAAATGCAGTAATCTCTGCACGGAGATCGTTG 59387 Query 94592 AGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTT 94651 |||| || || ||||| || |||| |||||||| ||| ||| || ||| || | Sbjct 59388 AGTACACGTCGCCGGATGAAGTTGCCGTGTGTAATTTGGCGTCCGTCGCACTGAACAGAT 59447 Query 94652 TCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCG 94711 |||| |||| | | |||| || | | ||| |||| | || Sbjct 59448 TCGTCAATGATGACAAAACGTATA------------ACTTTGAGAAGCTAAAAGAAGTCA 59495 Query 94712 CGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGG 94771 | || | || ||| || |||| | || || |||||||||||| |||| | Sbjct 59496 CTAAAATCGTCGTGCAGAATCTAAACAAAATCATAGAGGTGAACTTCTACCCGATCCCAG 59555 Query 94772 AGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGG 94831 | || ||||||||||| || ||||||||| ||||| ||||| || || || || || | Sbjct 59556 AAGCCAAGAACTCAAACATGCGGCATCGGCCGATCGGAATCGGTGTTCAAGGATTGGCCG 59615 Query 94832 ACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGA 94891 | || | || |||||||| | || || || || | || |||||| Sbjct 59616 ATGCTTTCGTCCTGATGCGTATCCCGTATGAAAGTGAAGCTGCAATCAAGTTGAATCAAC 59675 Query 94892 ACATATTCGAAAGCATTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCG 94950 | || ||||||| |||||| || || || | ||| ||| | | || | | || | Sbjct 59676 AGATTTTCGAAACCATTTACTATGGTGCGTTAGAAGCAAGCTGCGAGCTCG--CTGA--G 59731 Query 94951 GACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTC 95010 | || | ||| | | || || | || || |||||||| || || | | Sbjct 59732 AAAATTGGCGTTTATGAAACTTACCCGGGCTGTCCGGTGAGCCAGGGCATCTTGCAATAC 59791 Query 95011 GACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTT 95070 ||| | ||| | |||| | | || | ||||||| ||||| | || Sbjct 59792 GACATGTGGAACAAAACGCCCACAGACCTATGGGACTGGGGTGCTCT---CAAAGAAAAA 59848 Query 95071 ATC---AAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACG 95127 ||| ||||| ||| | |||| |||| | | || || |||||||| |||||||| Sbjct 59849 ATCGCTAAACATGGTCTCCGAAACTCGCTCTTATTAGCACCGATGCCCACCGCCTCCACC 59908 Query 95128 GCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGG 95187 || || ||||| ||||| |||||||| ||||| || || || || ||| | ||| | | Sbjct 59909 GCACAAATCCTCGGCAATAACGAGTCCTTCGAGCCTTTTACGTCTAACATCTACCAGCGC 59968 Query 95188 CGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGAC 95243 |||| || | || || |||| ||| | ||| | || || || || || ||||| Sbjct 59969 AGGGTCCTGTCGGGCGAGTTCCAGGTCGTGAACCATCATCTGCTGCGAGATCTGAC 60024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494563645583960