Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq955 138 2e-27 seq137 87.8 3e-12 >seq955 Length=106330 Score = 138 bits (152), Expect = 2e-27 Identities = 327/494 (66%), Gaps = 0/494 (0%) Strand=Plus/Minus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899 || || || ||||| || || |||||| | || || | | ||||| || |||||||| Sbjct 60348 TTATCAACAGTGAATTGGATCGCGTTCGCAGCCGGTTTCGTCCTCAGGTAATACATGCCA 60289 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 || || | ||| | | ||| ||| | ||| || || | | ||| | |||||| Sbjct 60288 GTTTTCAAACCCATTTTCCATGCGTGAAAGTGAATTGATGTTAATTTACCATAGTTGGGT 60229 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019 || |||| |||||||| | |||||||| ||||| || |||| | | ||||| || ||| Sbjct 60228 TCAGCCACATGAATGTTGAATGACTGGCTCTGGTCTATAAAAGCCCCTCGATCAGCTGCC 60169 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079 || | || | ||||| ||||||||||| || |||||| ||| ||||| | | | Sbjct 60168 ATCTGAATGCTCGTCTTGACTGAAATCTCCCAGACTGTCTTGTACAATTCTCTTATTTCT 60109 Query 204080 TGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTC 204139 | || | | |||| | || || || |||| | || | | | || | Sbjct 60108 TTGGGAATAGCTTCAATATTTTGGACAGATCCATTGTTGTGAATGATTAGGTTTTTCATA 60049 Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 || || |||||| | || | | |||| || |||| ||| || |||| | || ||| Sbjct 60048 TCTTCATCCCACAAGTCCGCCTCGGTCAGATCTCGCAGCAGATGATGGTTCACGACCTGG 59989 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || || || ||||| |||| || | | | ||| || || || ||||| | |||| Sbjct 59988 AACTCGCCCGACAGGACCCTGCGCTGGTAGATGTTAGACGTAAAAGGCTCGAAGGACTCG 59929 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 || ||||||| || || |||||| ||| |||||||| || || | | || ||||| Sbjct 59928 TTATTGCCGAGGATTTGTGCGGTGGAGGCGGTGGGCATCGGTGCTAATAAGAGCGAGTTT 59869 Query 204320 CGCACACCGTATTT 204333 || | ||| | ||| Sbjct 59868 CGGAGACCATGTTT 59855 >seq137 Length=194913 Score = 87.8 bits (96), Expect = 3e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 159741 CCGCCAGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCC 159800 || |||| | ||||| ||||| || |||||||| |||| |||| ||||| || | Sbjct 22024 CCACCAGTAGTCTGTCCGCCACGAACTCGATGTAATCCGACATGAGCTCGCAGTTCATGC 22083 Query 159801 CCAGCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGG 159860 ||||||||| ||||||||||| || | || ||||||| ||| || |||| || || Sbjct 22084 CCAGCAGCCGCACGGGGAGCGCGTCAGTGAGGAACTCCTGCTCTATGACGACGGCGTCCT 22143 Query 159861 TCACAATCTGC 159871 |||| |||||| Sbjct 22144 TCACTATCTGC 22154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794898752508560