Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3481 136 9e-27 seq4530 123 6e-23 seq3754 120 7e-22 seq3664 120 7e-22 >seq3481 Length=53562 Score = 136 bits (150), Expect = 9e-27 Identities = 165/224 (74%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || || || || | ||| ||||| || ||||| |||| ||||| || | || || | Sbjct 24269 AGCCTGAGCACCAAGTGAAGAGTAGATTCCTTCTGGATATTGTAATCGGACAGGGTGCGG 24210 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||||||| || ||||||||||||||||||||||||||||| ||| || || Sbjct 24209 CCATCTTCCAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGAATACCCTCC 24150 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||||||||| ||||||| || | |||||| | | || || || | ||| Sbjct 24149 TTATCCTGAATCTTGGCCTTCACGTTCTCAATGGTGTCCGAGGCCTCCACCTCAAGGGTG 24090 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || ||||| || || || ||||| || ||||| || |||||| Sbjct 24089 ATGGTCTTCCCGGTTAGGGTTTTGACGAAAATCTG---CATTTT 24049 >seq4530 Length=43051 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| || ||||| || ||||| ||||||||||| | ||||||||| | || || | || Sbjct 11649 TCTAAGCACAAGATGTAGAGTTGACTCCTTTTGAATGTTGTAGTCTGACAGTGTGCGGCC 11708 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| || ||||| || ||||||||||||||||||||||| || || ||||| Sbjct 11709 ATCTTCAAGTTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCTTCCTT 11768 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || ||| ||| || |||| ||||| | | || || || | ||||| Sbjct 11769 GTCTTGGATTTTTGCCTTAACATTCTCGATTGTGTCGGAAGCCTCAACCTCGAGTGTGAT 11828 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || ||||| ||||| || || Sbjct 11829 GGTCTTGCCAGTCAGTGTTTTTACAAAGATCTG 11861 Score = 118 bits (130), Expect = 2e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| || || || || || || | ||||||||||| | ||| Sbjct 12100 CGCAGACGCAGCACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCAGATAGAGTG 12159 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| |||||||| || ||||| || || | ||||||||| ||| ||| ||| Sbjct 12160 CGTCCATCTTCTAGCTGCTTGCCAGCGAAAATAAGTCTCTGCTGGTCTGGAGGAATACCT 12219 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| || ||| || || ||| || | ||||| | | || || ||||| Sbjct 12220 TCTTTATCCTGGAT-TTTGGCTTTTACGTTCTCAATAGTGTCAGAGGCCTCAACTTCCAA 12278 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || |||||||| || |||||||| Sbjct 12279 AGTTATAGTTTTGCCAGTTAGAGTTTTAACGAAAATTTG 12317 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| ||||| |||||||| |||| ||||||||| | || || Sbjct 12785 CGCAGACGCAGTACCAAGTGTAGAGTAGACTCCTTCTGGATGTTGTAGTCTGACAGTGTG 12844 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| ||||| |||||||| ||||| || | |||||||||||| ||| ||| Sbjct 12845 CGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCCGGGGGAATGCCT 12904 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| || || ||| || || | ||| || | | ||| || || | Sbjct 12905 TCTTTGTCCTGGATTTTGGCCTTTACATTCTCAATGGTATCGGAAGCTTCAACCTCAAGA 12964 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || | ||| || || || || || Sbjct 12965 GTAATGGTTTTACCAGTCAAAGTCTTTACGAAGATCTG 13002 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || |||||||| || || | ||||||||| | || || | |||||||| ||||| Sbjct 13487 TGAAGGGTCGACTCTTTCTGAATGTTGTAGTCTGACAGTGTGCGGCCATCTTCTAGCTGT 13546 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 |||||||| ||||| || | |||||||||||| ||| ||||| ||||| || || Sbjct 13547 TTTCCGGCAAAGATAAGTCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATTTTG 13606 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | ||| |||| | ||| || || | ||||| ||||| || || Sbjct 13607 GCCTTTACATTCTCAATGGTATCTGAAGCTTCAACCTCAAGTGTGATTGTCTTGCCAGTC 13666 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || Sbjct 13667 AGTGTTTTTACGAAGATCTG 13686 Score = 98.7 bits (108), Expect = 2e-15 Identities = 109/144 (76%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | || || | || || |||||||| || || | ||||||||| | || || Sbjct 12327 TCGAAGGCGCAATACTAAATGAAGCGTCGACTCTTTCTGAATGTTGTAGTCGGACAGTGT 12386 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||| |||||||| ||||||||||||||||| |||||||||||||| || || || Sbjct 12387 GCGTCCGTCTTCCAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATGCC 12446 Query 199528 TTCTCGCTCCTGAATCTTTTGCTT 199551 ||| ||||| || ||| |||| Sbjct 12447 TTCCTTGTCCTGGAT-TTTAGCTT 12469 Score = 98.7 bits (108), Expect = 2e-15 Identities = 98/126 (78%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || |||||||| || || | ||||||||| | || || | ||| |||||||| || Sbjct 13030 GTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCCGACAGTGTGCGTCCGTCTTCCAGTTG 13089 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||||||||||||| |||||||||||||| || || ||||| ||||| || || Sbjct 13090 CTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGGAT-TT 13148 Query 199546 TTGCTT 199551 | |||| Sbjct 13149 TAGCTT 13154 Score = 96.9 bits (106), Expect = 8e-15 Identities = 144/202 (71%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || |||||||| || || | ||||||||| | || || | ||| |||||||| ||| Sbjct 12574 TGAAGGGTCGACTCTTTCTGAATGTTGTAGTCCGACAGTGTGCGTCCGTCTTCCAGTTGC 12633 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 |||||||||||||| |||||||||||||| || || ||||| ||||| || ||| Sbjct 12634 TTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGGAT-TTT 12692 Query 199547 TGC--TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 || || || || | ||| || | | ||| || || | ||||| ||||| || | Sbjct 12693 GGCCTTTAACATTCTCAATGGTATCGGAAGCTTCAACCTCAAGTGTGATGGTCTTGCCAG 12752 Query 199605 TGAGAGTTTTCACAAAAATTTG 199626 | | || || || || || || Sbjct 12753 TCAAGGTCTTAACGAAGATCTG 12774 Score = 87.8 bits (96), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 |||||||||||||||||||| ||||||| ||| | || || |||| |||||| | ||| Sbjct 12422 CTTATCTTCGCCGGAAAGCAACTGGAAGACGGACGCACACTGTCCGACTACAACATTCAG 12363 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030 |||||||| || ||||| | || ||| | |||||| Sbjct 12362 AAAGAGTCGACGCTTCATTTAGTATTGCGCCTTCGA 12327 >seq3754 Length=50117 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 |||||| || || || ||||||| |||||| || | | || | |||||||| || || Sbjct 975 GTGGAGGGTAGATTCTTTTTGGATGTTGTAATCGGAGAGGGTACGGCCATCTTCAAGTTG 916 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||| ||||||||||| | ||||||||| || || ||||| || ||||| || Sbjct 915 TTTTCCAGCGAAGATGAGTCTCTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTGAATTTT 856 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||| |||| |||||||| | |||||| || | ||||| || ||||| || Sbjct 855 AGCCTTGACGTTCTCGATGGTGTCTGAAGCTTCTACTTCGAGTGTGATGGTTTTACCTGT 796 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || |||||||| ||||| Sbjct 795 CAGGGTCTTCACAAAGATTTG 775 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || || || || || ||||||| |||||| || | || ||| Sbjct 1676 CGAAGACGAAGAACCAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCCGACAGAGTG 1617 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| || |||||||| || || ||||| || |||||||||||||| || |||||| Sbjct 1616 CGTCCGTCCTCCAGCTGTTTGCCAGCGAAAATCAGACGCTGCTGGTCTGGCGGAATTCCC 1557 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| || || | |||||| | | || || ||||| Sbjct 1556 TCTTTGTCTTGGATCTTAGCCTTTACATTCTCAATGGTGTCAGAAGCCTCAACTTCCAAA 1497 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || |||||||| || || Sbjct 1496 GTTATTGTTTTGCCTGTCAGGGTCTTCACAAAGATCTG 1459 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| || | || || | ||| ||||| || || || |||| ||||| |||| | || Sbjct 309 TCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAAGGGT 250 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||| || || ||||| |||||||| | ||||| ||||| || ||||| Sbjct 249 ACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCC 190 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || || ||||| |||||| ||| | ||||| | | ||| || || | Sbjct 189 TTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCCGAAGCTTCAACTTCAAG 130 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || || ||||||||||| Sbjct 129 AGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATTTG 91 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || || || |||| ||||| |||| | || | |||||||| || || Sbjct 1203 GTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAAGGGTACGGCCATCTTCAAGTTG 1144 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||| |||||||| | ||||| ||||| || ||||||||| || || ||||| Sbjct 1143 TTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTCTTTGTCTTGGATCTT 1084 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 |||||| ||| | ||||| | | ||| || || | ||||| ||||| || || Sbjct 1083 GGCCTTCACATTTTCAATAGTGTCCGAAGCTTCAACTTCAAGAGTGATTGTCTTTCCAGT 1024 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || || ||||||||||| Sbjct 1023 AAGGGTCTTGACAAAAATTTG 1003 >seq3664 Length=101255 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 |||||| || || || ||||||| |||||| || | | || | |||||||| || || Sbjct 94297 GTGGAGGGTAGATTCTTTTTGGATGTTGTAATCGGAGAGGGTACGGCCATCTTCAAGTTG 94238 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||| ||||||||||| | ||||||||| || || ||||| || ||||| || Sbjct 94237 TTTTCCAGCGAAGATGAGTCTCTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTGAATTTT 94178 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||| |||| |||||||| | |||||| || | ||||| || ||||| || Sbjct 94177 AGCCTTGACGTTCTCGATGGTGTCTGAAGCTTCTACTTCGAGTGTGATGGTTTTACCTGT 94118 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||| || |||||||| || || Sbjct 94117 GAGGGTCTTCACAAAGATCTG 94097 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 || || ||||| || || || ||||||| ||||||||| | | || | |||||||| Sbjct 94530 ACCAGATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCTTCA 94471 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540 || |||||||| || ||||| | |||||| ||||| || ||| || || || || Sbjct 94470 AGTTGCTTTCCAGCAAAGATTAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 94411 Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600 || || ||| ||| || | |||||| | || || || ||||| ||||| || || Sbjct 94410 ATTTTAGCCTTGACGTTCTCAATGGTGTCCGATGCCTCAACCTCCAAAGTGATTGTTTTG 94351 Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || ||||||||||| Sbjct 94350 CCCGTCAGGGTCTTGACAAAAATTTG 94325 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || || || || || ||||||| |||||| || | || ||| Sbjct 96138 CGAAGACGAAGAACCAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCCGACAGAGTG 96079 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| || |||||||| || || ||||| || |||||||||||||| || |||||| Sbjct 96078 CGTCCGTCCTCCAGCTGTTTGCCAGCGAAAATCAGACGCTGCTGGTCTGGCGGAATTCCC 96019 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| || || | |||||| | | || || ||||| Sbjct 96018 TCTTTGTCTTGGATCTTAGCCTTTACATTCTCAATGGTGTCAGAAGCCTCAACTTCCAAA 95959 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || |||||||| || || Sbjct 95958 GTTATTGTTTTGCCTGTCAGGGTCTTCACAAAGATCTG 95921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178531877623667