Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq4530 98.7 7e-16
>seq4530
Length=43051
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || |||| |||||||||||| || | ||| || || || || || || || | |
Sbjct 12779 CCACCACGCAGACGCAGTACCAAGTGTAGAGTAGACTCCTTCTGGATGTTGTAGTCTGAC 12838
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| ||| |||| || | ||||| ||| |||| || | | |||||| |||| |||
Sbjct 12839 AGTGTGCGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCCGGGGGA 12898
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||||||||| ||||| || | || | | || || | ||| ||
Sbjct 12899 ATGCCTTCTTTGTCCTGGATTTTGGCCTTTACATTCTCAATGGTATCGGAAGCTTCAACC 12958
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | |||||| |||||||| || ||||| |||||||||||||||||
Sbjct 12959 TCAAGAGTAATGGTTTTACCAGTCAAAGTCTTTACGAAGATCTGCAT 13005
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||| | |||| ||| ||||| | || ||||| || || || || |||| |
Sbjct 12322 CCACCTCGAAGGCGCAATACTAAATGAAGCGTCGACTCTTTCTGAATGTTGTAGTCGGAC 12381
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| |||| | || |||| ||| || ||| | || || | ||||||||| || | |||
Sbjct 12382 AGTGTGCGTCCGTCTTCCAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGG 12441
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| ||||| ||||| || | | || || | ||| ||
Sbjct 12442 ATGCCTTCCTTGTCCTGGATTTTAGCTTTAACATTCTCAATCGTATCGGAAGCTTCAACC 12501
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | ||||| || || || || ||||| |||||||||||||||||
Sbjct 12502 TCAAGTGTAATGGTCTTGCCAGTCAAAGTCTTTACGAAGATCTGCAT 12548
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || |||| ||||| ||| || || | || ||||| || || || || || | |
Sbjct 13007 CCACCGCGCAGACGCAATACTAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCCGAC 13066
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| |||| | || |||| ||| || ||| | || || | ||||||||| || | |||
Sbjct 13067 AGTGTGCGTCCGTCTTCCAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGG 13126
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| ||||| ||||| || | | || || | ||| ||
Sbjct 13127 ATGCCTTCCTTGTCCTGGATTTTAGCTTTAACATTCTCAATCGTATCGGAAGCTTCAACC 13186
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | ||||| || || || || ||||| |||||||||||||||||
Sbjct 13187 TCAAGTGTAATGGTCTTGCCAGTCAAAGTCTTTACGAAGATCTGCAT 13233
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || |||| |||||||||||| || | ||| ||| || || || || || || | |
Sbjct 13919 CCACCACGCAGACGCAGTACCAAGTGTAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAC 13978
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| ||| |||| || | ||||| ||| |||| || | | |||||| || | |||
Sbjct 13979 AGTGTGCGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 14038
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||| |||||||| || || ||| | || | | || || || || ||
Sbjct 14039 ATGCCCTCTTTGTCCTGGATCTTAGCTTTTACATTCTCGATGGTATCAGCAGGCTCGACC 14098
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||||||| || || ||||| || || || || ||||||||||||||
Sbjct 14099 TCCAAAGTGATGGTCTTACCAGTCAACGTCTTCACGAAGATCTGCAT 14145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347260369737833
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |