Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq955 82.4 9e-11 seq137 82.4 9e-11 >seq955 Length=106330 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 ||||||| |||||||| ||| ||| | | ||||| || ||| || || | Sbjct 59825 GACTGGGGTGCTCTCAAAGAAAAAATCGCTAAACATGGTCTCCGAAACTCGCTCTTATTA 59884 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 ||||| ||||| || |||||||||||||||||| | || ||||| || | ||| || || Sbjct 59885 GCACCGATGCCCACCGCCTCCACCGCACAAATCCTCGGCAATAACGAGTCCTTCGAGCCT 59944 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 113030 | ||| | |||||||| | | | || ||| |||| ||||| | | || ||| | Sbjct 59945 TTTACGTCTAACATCTACCAGCGCAGGGTCCTGTCGGGCGAGTTCCAGGTCGTGAACCAT 60004 Query 113031 CATCT 113035 ||||| Sbjct 60005 CATCT 60009 >seq137 Length=194913 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 102122 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTG 102180 |||| ||||| ||||| ||||| | ||||| | | | ||| || |||| | | Sbjct 23564 TCAAGAAGAAGGCGGACTGGGCGCTCCAGTGGATCGGCAGCAAGACGGCCACCTTCGGCG 23505 Query 102181 AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CT 102239 |||| || | ||||| || | || ||||| || |||||||| || |||| ||| || Sbjct 23504 AGCGCATCGTGGCATTCGCATCCGTCGAGGGCATATTCTTCTCGGGCAGCTTC-GCGTCT 23446 Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299 || | ||| | ||||| || ||||| ||||| ||||| ||| ||| ||| | ||| Sbjct 23445 ATATTCTGGATGAAGAAACGCGGTCTGATGCCCGGTCTGACATTCAGCAATGAGATGATC 23386 Query 102300 TCTCGTGACGA 102310 ||||||||||| Sbjct 23385 TCTCGTGACGA 23375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620542202816720