Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq11548 107 2e-18 >seq11548 Length=10572 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 29872 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 29931 || |||| ||| || ||||||| || || || || |||||||| || || ||||| ||| Sbjct 5570 CCAGTGATGTGTGCGATCATGTGAGTCAGCAGTGAATAGCTGGCTATATTGAAGGGCACC 5511 Query 29932 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACG 29991 || ||||||||||| | ||||||||| || || || |||| ||| | |||| Sbjct 5510 CCAAGCCCCATGTCTGCACTCCTCTGGTACAGTATGCAGGACAGCTTGCCGCTGGCCACG 5451 Query 29992 TAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTC 30051 | |||||| | | |||||| || ||||||||||| | || |||| || ||| Sbjct 5450 TGGAACTGAGCGAGGCAGTGGCAGGGCGGAAGAGCCATCTTGTTCAGGTCTGATGGATTC 5391 Query 30052 CAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTG 30093 || ||||||| | || | || ||| ||||||| || ||| Sbjct 5390 CAAGCGCACATCAGCATCCTCCGGTCGGCTGGGTTCTTTCTG 5349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408489110323373