Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq754 154 1e-32
seq3754 114 1e-20
seq3664 114 1e-20
seq8989 111 1e-19
seq3207 111 1e-19
seq3481 93.3 3e-14
seq4530 91.5 1e-13
seq7468 87.8 1e-12
>seq754
Length=177731
Score = 154 bits (170), Expect = 1e-32
Identities = 337/500 (67%), Gaps = 6/500 (1%)
Strand=Plus/Minus
Query 27701 GTGGTGGCCGCTTACTTTGTCGAGTGGGGTGTGTATGGTAGACAGTATCCGGCCAACAAA 27760
|| |||| |||||||| ||||| ||||| ||||| ||| ||| ||| | ||
Sbjct 51603 GTTGTGGGAGCTTACTTCGTCGAATGGGGCGTGTACCCCAGAAAGTTTCCAGTGGACCGT 51544
Query 27761 CTACCCATACCAAATCTGACACATTTGCTGTACGGCTTTGTGCCCATTTGCGGCGGAGAC 27820
| || |||||||||| || ||| | |||||||| || | || |||||||| || ||
Sbjct 51543 ATCCCAGTACCAAATCTCACGCATCTCCTGTACGGTTTCATCCCAATTTGCGGAGGTGAT 51484
Query 27821 GGTATCAACGATAGCCTAAAACAGATCCCCAATTC--TTTTGAGGTCCTCCAAAAGTCAT 27878
|| || ||||| || | || ||||| || | ||| | | || ||| || |
Sbjct 51483 GGCATTAACGACAGTTTGAAGGAGATCG--AAGGCAGTTTCCAAGCTCTGCAACGTTCCT 51426
Query 27879 GCTCAAACCGAGCCGACTTTAGTGTGAGCATACACGATATATGGGGCGCGCTGCAAAAAC 27938
|| ||||| ||||| | |||| || || ||| ||||| || |||| ||||
Sbjct 51425 GCAGCGGCCGAGAGGACTTCAAAGTGACAATCCATGATCCATGGGCAGCCTTGCAGAAAC 51366
Query 27939 CGCAAAAGGGTGTAGAGGCGTGGAACGAGCCGTACAAGGGTAACTTTGGCCAGTTGATGG 27998
| || || ||| | | |||||||| || ||||| || || || |||||| | |||
Sbjct 51365 CCCAGAAAGGTCTGTCTTCTTGGAACGAACCTTACAAAGGCAATTTCGGCCAGCTCATGA 51306
Query 27999 CCATCAAACGACACCATCCCCACCTATCCATACTGCCCTCGATTGGTGGGTGGACTCTGA 28058
| |||| | | || |||| || || || || || ||||| ||||| |||
Sbjct 51305 TGTTGAAACAAGCGAAACCTGACCTGAAAATCCTCCCATCCATCGGTGGCTGGACCCTGG 51246
Query 28059 GCGATCCATTCTTTTTTATGCACGACCCGGCCAAGCGTG-CCGTGTTTGTAGAGTCTGTG 28117
|||||||||||||| | | ||| | ||||| | | |||| || || | || |||
Sbjct 51245 CTGATCCATTCTTTTTCTTAAATGACAAGACCAAGAGAGACCGT-TTCGTCGCATCGGTG 51187
Query 28118 CGCGAATTTCTGCAAACGTGGAAGTTCTTTGACGGAGTCGATTTGGACTGGGAGTTTCCG 28177
|| || |||||||| ||||| ||||| || || || ||| | || |||||||| ||
Sbjct 51186 AAAGACTTCCTGCAAACTTGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCT 51127
Query 28178 GGTGGAAAGGGAGCCAACCC 28197
|| || || || ||||||||
Sbjct 51126 GGAGGCAAAGGTGCCAACCC 51107
>seq3754
Length=50117
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| ||||| || || ||| || || || |||||||||||||| || | |||
Sbjct 1445 AGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGAAAGGGTGCGA 1386
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| |||||||| |||| |||||||| || | ||||| |||||||
Sbjct 1385 CCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCCTCC 1326
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| ||||| || || | ||
Sbjct 1325 TTGTCTTGGATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACTTCAAGAGTT 1266
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| || || | || || || ||||| |||||
Sbjct 1265 ATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 1228
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| ||||| || || ||| || |||||||| || |||||||| || | ||
Sbjct 761 AGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGAATGTTATAATCAGAAAGGGTGCGG 702
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | ||||| |||||||| |||| |||||||| || | ||||| |||||||
Sbjct 701 CCATCTTCAAGTTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCCTCC 642
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| ||||| || || | ||
Sbjct 641 TTGTCTTGTATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACTTCAAGAGTT 582
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| || || | || || || ||||| |||||
Sbjct 581 ATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 544
>seq3664
Length=101255
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| ||||| || || ||| || || || |||||||||||||| || | |||
Sbjct 95907 AGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGAAAGGGTGCGA 95848
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| |||||||| |||| |||||||| || | ||||| |||||||
Sbjct 95847 CCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCCTCC 95788
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| ||||| || || | ||
Sbjct 95787 TTGTCTTGGATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACTTCAAGAGTT 95728
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| || || | || || || ||||| |||||
Sbjct 95727 ATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 95690
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| ||||| || || ||| ||||| || |||||||||||||| || | ||
Sbjct 93855 AGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAGAGGGTGCGC 93796
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | ||||| || || || |||| |||||||| || | |||| |||||||
Sbjct 93795 CCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGTGGAATGCCCTCC 93736
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| || || || || | | | || |||||||| ||||||| ||
Sbjct 93735 TTGTCTTGTATTTTCGCCTTGACGTTCTCAATGGTGTCCGACGCCTCGACCTCCAAAGTG 93676
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| ||||||| || || ||||| ||||||||
Sbjct 93675 ATTGTTTTGCCCGTCAGGGTCTTCACAAATATCTGCAT 93638
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| ||||| || || ||| || |||||||| || |||||||| || | ||
Sbjct 95223 AGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGAATGTTATAATCAGAAAGGGTGCGG 95164
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | ||||| || ||||| |||| |||||||| || | ||||| |||||||
Sbjct 95163 CCATCTTCAAGTTGCTTCCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCCTCC 95104
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| ||||| || || | ||
Sbjct 95103 TTGTCTTGTATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACTTCAAGAGTT 95044
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| || || | || || || ||||| |||||
Sbjct 95043 ATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 95006
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | || ||||| ||||| || || ||| ||||| || ||||||||||||||
Sbjct 94776 CCGCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAA 94717
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || | || || | || || || || || |||| ||||||||| || | |||
Sbjct 94716 AGGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGG 94657
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| || || ||||| ||||| || ||| | | || || || || || ||
Sbjct 94656 ATTCCTTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCCGAAGCTTCAACT 94597
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | || || || ||||| || | || || ||||||||||||||
Sbjct 94596 TCAAGAGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATCTGCAT 94550
>seq8989
Length=18647
Score = 111 bits (122), Expect = 1e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 9001 CCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAGTAACCTCTACC 9060
|| || || ||||| || ||||| || | |||||| |||| | || || ||| |
Sbjct 34 CCTGTAGAACCAAAACCCCCCTCACCCCTATTGGTCTCAGATAAGTTGGTTACTTCTTGC 93
Query 9061 AGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACG 9120
| ||||| ||||||| ||||||||| | ||| || ||||| || || || || |
Sbjct 94 AACACTGGATAGAAGATTTTTTCACAAATAAGTTGGGCGATCCTATCACCTTTTTTGATT 153
Query 9121 ACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCA 9180
||| || ||||| ||||||||||| | || || ||||| || ||||||||||| |||
Sbjct 154 GGAAAATCAGTGTCTGAATGATTGAATATGACAACACCCACATTGCCCCTGTAATCTTCA 213
Query 9181 TCGATCACACCAGC 9194
|||||||| || ||
Sbjct 214 TCGATCACTCCGGC 227
>seq3207
Length=99900
Score = 111 bits (122), Expect = 1e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 9001 CCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAGTAACCTCTACC 9060
|| || || ||||| || ||||| || | |||||| |||| | || || ||| |
Sbjct 1381 CCTGTAGAACCAAAACCCCCCTCACCCCTATTGGTCTCAGATAAGTTGGTTACTTCTTGC 1322
Query 9061 AGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACG 9120
| ||||| ||||||| ||||||||| | ||| || ||||| || || || || |
Sbjct 1321 AACACTGGATAGAAGATTTTTTCACAAATAAGTTGGGCGATCCTATCACCTTTTTTGATT 1262
Query 9121 ACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCA 9180
||| || ||||| ||||||||||| | || || ||||| || ||||||||||| |||
Sbjct 1261 GGAAAATCAGTGTCTGAATGATTGAATATGACAACACCCACATTGCCCCTGTAATCTTCA 1202
Query 9181 TCGATCACACCAGC 9194
|||||||| || ||
Sbjct 1201 TCGATCACTCCGGC 1188
>seq3481
Length=53562
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || ||||||| | |||||| || || || || || || ||||||||||| ||
Sbjct 24278 CCTCCTCTTAGCCTGAGCACCAAGTGAAGAGTAGATTCCTTCTGGATATTGTAATCGGAC 24219
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || | || |||| ||| || ||||| || || || ||||| || |||| |||
Sbjct 24218 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGA 24159
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| |||||||| || |||||| || || | | | || || |||||||||
Sbjct 24158 ATACCCTCCTTATCCTGAATCTTGGCCTTCACGTTCTCAATGGTGTCCGAGGCCTCCACC 24099
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGTGT 48773
|| | || || || || || || | ||||| || ||||||||||| |||||
Sbjct 24098 TCAAGGGTGATGGTCTTCCCGGTTAGGGTTTTGACGAAAATCTGCATTTTGTGT 24045
>seq4530
Length=43051
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||||| || || || |||||| ||||| ||||| || |||| | ||
Sbjct 11875 AGACGCAGCACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAGTCCGATAAGGTGCGT 11934
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||| || ||||| || |||| ||| || || | |||| |||||
Sbjct 11935 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGTCTCTGCTGGTCTGGAGGAATACCCTCT 11994
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || || || ||||||| | | | || || ||||| ||||| | ||
Sbjct 11995 TTATCTTGGATTTTGGCTTTTACATTCTCAATTGTATCGGAGGCCTCTACCTCAAGAGTG 12054
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||| ||||||||||| ||||||||
Sbjct 12055 ATGGTCTTGCCAGTCAGTGTTTTTACAAAGATCTGCAT 12092
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616
||| | |||||| || ||| |||||||| ||||| || || || | || | || ||
Sbjct 11655 CACAAGATGTAGAGTTGACTCCTTTTGAATGTTGTAGTCTGACAGTGTGCGGCCATCTTC 11714
Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676
| ||||| || || || || || ||||| || || | ||| | ||| ||||||||
Sbjct 11715 AAGTTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTG 11774
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
|| ||| || ||| | | | || || ||||| ||||| | || || || ||
Sbjct 11775 GATTTTTGCCTTAACATTCTCGATTGTGTCGGAAGCCTCAACCTCGAGTGTGATGGTCTT 11834
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| ||||||||||| ||||||||
Sbjct 11835 GCCAGTCAGTGTTTTTACAAAGATCTGCAT 11864
>seq7468
Length=24208
Score = 87.8 bits (96), Expect = 1e-12
Identities = 74/91 (81%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 8170 CGTAACGTGTGCTTTGTTCCGTGCGGACATGTGGTGGCATGCGCCAAGTGCGCTTTAACC 8229
|| ||||||||||| || |||||||| || |||||||| |||||||||||||| | ||
Sbjct 19056 CGCAACGTGTGCTTCGTGCCGTGCGGGCACGTGGTGGCGTGCGCCAAGTGCGCGCTCTCC 18997
Query 8230 ACGAACACGTGCCCAATGTGTAGGCAGAAGT 8260
|| |||| |||||| ||||| ||| || ||
Sbjct 18996 ACCAACAAGTGCCCCATGTGCCGGCGGACGT 18966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380817814290723
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