Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq754 154 1e-32 seq3754 114 1e-20 seq3664 114 1e-20 seq8989 111 1e-19 seq3207 111 1e-19 seq3481 93.3 3e-14 seq4530 91.5 1e-13 seq7468 87.8 1e-12 >seq754 Length=177731 Score = 154 bits (170), Expect = 1e-32 Identities = 337/500 (67%), Gaps = 6/500 (1%) Strand=Plus/Minus Query 27701 GTGGTGGCCGCTTACTTTGTCGAGTGGGGTGTGTATGGTAGACAGTATCCGGCCAACAAA 27760 || |||| |||||||| ||||| ||||| ||||| ||| ||| ||| | || Sbjct 51603 GTTGTGGGAGCTTACTTCGTCGAATGGGGCGTGTACCCCAGAAAGTTTCCAGTGGACCGT 51544 Query 27761 CTACCCATACCAAATCTGACACATTTGCTGTACGGCTTTGTGCCCATTTGCGGCGGAGAC 27820 | || |||||||||| || ||| | |||||||| || | || |||||||| || || Sbjct 51543 ATCCCAGTACCAAATCTCACGCATCTCCTGTACGGTTTCATCCCAATTTGCGGAGGTGAT 51484 Query 27821 GGTATCAACGATAGCCTAAAACAGATCCCCAATTC--TTTTGAGGTCCTCCAAAAGTCAT 27878 || || ||||| || | || ||||| || | ||| | | || ||| || | Sbjct 51483 GGCATTAACGACAGTTTGAAGGAGATCG--AAGGCAGTTTCCAAGCTCTGCAACGTTCCT 51426 Query 27879 GCTCAAACCGAGCCGACTTTAGTGTGAGCATACACGATATATGGGGCGCGCTGCAAAAAC 27938 || ||||| ||||| | |||| || || ||| ||||| || |||| |||| Sbjct 51425 GCAGCGGCCGAGAGGACTTCAAAGTGACAATCCATGATCCATGGGCAGCCTTGCAGAAAC 51366 Query 27939 CGCAAAAGGGTGTAGAGGCGTGGAACGAGCCGTACAAGGGTAACTTTGGCCAGTTGATGG 27998 | || || ||| | | |||||||| || ||||| || || || |||||| | ||| Sbjct 51365 CCCAGAAAGGTCTGTCTTCTTGGAACGAACCTTACAAAGGCAATTTCGGCCAGCTCATGA 51306 Query 27999 CCATCAAACGACACCATCCCCACCTATCCATACTGCCCTCGATTGGTGGGTGGACTCTGA 28058 | |||| | | || |||| || || || || || ||||| ||||| ||| Sbjct 51305 TGTTGAAACAAGCGAAACCTGACCTGAAAATCCTCCCATCCATCGGTGGCTGGACCCTGG 51246 Query 28059 GCGATCCATTCTTTTTTATGCACGACCCGGCCAAGCGTG-CCGTGTTTGTAGAGTCTGTG 28117 |||||||||||||| | | ||| | ||||| | | |||| || || | || ||| Sbjct 51245 CTGATCCATTCTTTTTCTTAAATGACAAGACCAAGAGAGACCGT-TTCGTCGCATCGGTG 51187 Query 28118 CGCGAATTTCTGCAAACGTGGAAGTTCTTTGACGGAGTCGATTTGGACTGGGAGTTTCCG 28177 || || |||||||| ||||| ||||| || || || ||| | || |||||||| || Sbjct 51186 AAAGACTTCCTGCAAACTTGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCT 51127 Query 28178 GGTGGAAAGGGAGCCAACCC 28197 || || || || |||||||| Sbjct 51126 GGAGGCAAAGGTGCCAACCC 51107 >seq3754 Length=50117 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || ||| || || || |||||||||||||| || | ||| Sbjct 1445 AGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGAAAGGGTGCGA 1386 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| |||||||| |||| |||||||| || | ||||| ||||||| Sbjct 1385 CCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCCTCC 1326 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| ||||| || || | || Sbjct 1325 TTGTCTTGGATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACTTCAAGAGTT 1266 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | || || || ||||| ||||| Sbjct 1265 ATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 1228 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || ||| || |||||||| || |||||||| || | || Sbjct 761 AGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGAATGTTATAATCAGAAAGGGTGCGG 702 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| |||||||| |||| |||||||| || | ||||| ||||||| Sbjct 701 CCATCTTCAAGTTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCCTCC 642 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| ||||| || || | || Sbjct 641 TTGTCTTGTATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACTTCAAGAGTT 582 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | || || || ||||| ||||| Sbjct 581 ATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 544 >seq3664 Length=101255 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || ||| || || || |||||||||||||| || | ||| Sbjct 95907 AGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGAAAGGGTGCGA 95848 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| |||||||| |||| |||||||| || | ||||| ||||||| Sbjct 95847 CCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCCTCC 95788 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| ||||| || || | || Sbjct 95787 TTGTCTTGGATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACTTCAAGAGTT 95728 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | || || || ||||| ||||| Sbjct 95727 ATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 95690 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || ||| ||||| || |||||||||||||| || | || Sbjct 93855 AGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAGAGGGTGCGC 93796 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || || || |||| |||||||| || | |||| ||||||| Sbjct 93795 CCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGTGGAATGCCCTCC 93736 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || || | | | || |||||||| ||||||| || Sbjct 93735 TTGTCTTGTATTTTCGCCTTGACGTTCTCAATGGTGTCCGACGCCTCGACCTCCAAAGTG 93676 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||||| || || ||||| |||||||| Sbjct 93675 ATTGTTTTGCCCGTCAGGGTCTTCACAAATATCTGCAT 93638 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || ||| || |||||||| || |||||||| || | || Sbjct 95223 AGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGAATGTTATAATCAGAAAGGGTGCGG 95164 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| |||| |||||||| || | ||||| ||||||| Sbjct 95163 CCATCTTCAAGTTGCTTCCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCCTCC 95104 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| ||||| || || | || Sbjct 95103 TTGTCTTGTATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACTTCAAGAGTT 95044 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | || || || ||||| ||||| Sbjct 95043 ATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 95006 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || ||||| ||||| || || ||| ||||| || |||||||||||||| Sbjct 94776 CCGCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAA 94717 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | || || || || || |||| ||||||||| || | ||| Sbjct 94716 AGGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGG 94657 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || ||||| ||||| || ||| | | || || || || || || Sbjct 94656 ATTCCTTCTTTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCCGAAGCTTCAACT 94597 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || ||||| || | || || |||||||||||||| Sbjct 94596 TCAAGAGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATCTGCAT 94550 >seq8989 Length=18647 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 9001 CCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAGTAACCTCTACC 9060 || || || ||||| || ||||| || | |||||| |||| | || || ||| | Sbjct 34 CCTGTAGAACCAAAACCCCCCTCACCCCTATTGGTCTCAGATAAGTTGGTTACTTCTTGC 93 Query 9061 AGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACG 9120 | ||||| ||||||| ||||||||| | ||| || ||||| || || || || | Sbjct 94 AACACTGGATAGAAGATTTTTTCACAAATAAGTTGGGCGATCCTATCACCTTTTTTGATT 153 Query 9121 ACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCA 9180 ||| || ||||| ||||||||||| | || || ||||| || ||||||||||| ||| Sbjct 154 GGAAAATCAGTGTCTGAATGATTGAATATGACAACACCCACATTGCCCCTGTAATCTTCA 213 Query 9181 TCGATCACACCAGC 9194 |||||||| || || Sbjct 214 TCGATCACTCCGGC 227 >seq3207 Length=99900 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 9001 CCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAGTAACCTCTACC 9060 || || || ||||| || ||||| || | |||||| |||| | || || ||| | Sbjct 1381 CCTGTAGAACCAAAACCCCCCTCACCCCTATTGGTCTCAGATAAGTTGGTTACTTCTTGC 1322 Query 9061 AGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACG 9120 | ||||| ||||||| ||||||||| | ||| || ||||| || || || || | Sbjct 1321 AACACTGGATAGAAGATTTTTTCACAAATAAGTTGGGCGATCCTATCACCTTTTTTGATT 1262 Query 9121 ACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCA 9180 ||| || ||||| ||||||||||| | || || ||||| || ||||||||||| ||| Sbjct 1261 GGAAAATCAGTGTCTGAATGATTGAATATGACAACACCCACATTGCCCCTGTAATCTTCA 1202 Query 9181 TCGATCACACCAGC 9194 |||||||| || || Sbjct 1201 TCGATCACTCCGGC 1188 >seq3481 Length=53562 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||||| | |||||| || || || || || || ||||||||||| || Sbjct 24278 CCTCCTCTTAGCCTGAGCACCAAGTGAAGAGTAGATTCCTTCTGGATATTGTAATCGGAC 24219 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| ||| || ||||| || || || ||||| || |||| ||| Sbjct 24218 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGA 24159 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||| || |||||| || || | | | || || ||||||||| Sbjct 24158 ATACCCTCCTTATCCTGAATCTTGGCCTTCACGTTCTCAATGGTGTCCGAGGCCTCCACC 24099 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGTGT 48773 || | || || || || || || | ||||| || ||||||||||| ||||| Sbjct 24098 TCAAGGGTGATGGTCTTCCCGGTTAGGGTTTTGACGAAAATCTGCATTTTGTGT 24045 >seq4530 Length=43051 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||||| || || || |||||| ||||| ||||| || |||| | || Sbjct 11875 AGACGCAGCACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAGTCCGATAAGGTGCGT 11934 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || |||| ||| || || | |||| ||||| Sbjct 11935 CCATCTTCAAGCTGCTTGCCAGCAAAGATAAGTCTCTGCTGGTCTGGAGGAATACCCTCT 11994 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || || || ||||||| | | | || || ||||| ||||| | || Sbjct 11995 TTATCTTGGATTTTGGCTTTTACATTCTCAATTGTATCGGAGGCCTCTACCTCAAGAGTG 12054 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||| ||||||||||| |||||||| Sbjct 12055 ATGGTCTTGCCAGTCAGTGTTTTTACAAAGATCTGCAT 12092 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||| | |||||| || ||| |||||||| ||||| || || || | || | || || Sbjct 11655 CACAAGATGTAGAGTTGACTCCTTTTGAATGTTGTAGTCTGACAGTGTGCGGCCATCTTC 11714 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 | ||||| || || || || || ||||| || || | ||| | ||| |||||||| Sbjct 11715 AAGTTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTG 11774 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 || ||| || ||| | | | || || ||||| ||||| | || || || || Sbjct 11775 GATTTTTGCCTTAACATTCTCGATTGTGTCGGAAGCCTCAACCTCGAGTGTGATGGTCTT 11834 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| ||||||||||| |||||||| Sbjct 11835 GCCAGTCAGTGTTTTTACAAAGATCTGCAT 11864 >seq7468 Length=24208 Score = 87.8 bits (96), Expect = 1e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 8170 CGTAACGTGTGCTTTGTTCCGTGCGGACATGTGGTGGCATGCGCCAAGTGCGCTTTAACC 8229 || ||||||||||| || |||||||| || |||||||| |||||||||||||| | || Sbjct 19056 CGCAACGTGTGCTTCGTGCCGTGCGGGCACGTGGTGGCGTGCGCCAAGTGCGCGCTCTCC 18997 Query 8230 ACGAACACGTGCCCAATGTGTAGGCAGAAGT 8260 || |||| |||||| ||||| ||| || || Sbjct 18996 ACCAACAAGTGCCCCATGTGCCGGCGGACGT 18966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380817814290723