Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq955 167 4e-36 seq137 141 2e-28 >seq955 Length=106330 Score = 167 bits (184), Expect = 4e-36 Identities = 932/1466 (64%), Gaps = 58/1466 (4%) Strand=Plus/Minus Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959 ||| ||| |||| || | |||||| || || || || ||||| | |||||| | ||| || Sbjct 60010 CAGATGATGGTTCACGACCTGGAACTCGCCCGACAGGACCCTGCGCTGGTAGATGTTAGA 59951 Query 212960 AGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCAT 213019 || | ||||||| | |||||| || || || || ||||| ||| ||| |||||||| Sbjct 59950 CGTAAAAGGCTCGAAGGACTCGTTATTGCCGAGGATTTGTGCGGTGGAGGCGGTGGGCAT 59891 Query 213020 GGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGG-CGCCGA-AGCTCT 213077 || || | | ||| ||| | | || || | |||| | || ||| | Sbjct 59890 CGGTGCTAATAAGAGCGAGTTTCGGAGACCATGTTTAGCGATTTTTTCTTTGAGAGCAC- 59832 Query 213078 GCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAG 213137 ||||||||||| ||||| | | | |||||||||||| | |||||| Sbjct 59831 -CCCAGTCCCAT---------AGGTCTGTGGGCGTTTTGTTCCACATGTCGTATTGCAAG 59782 Query 213138 ATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGC 213197 ||||| | |||||| || | |||| |||||| || |||| | || || ||| Sbjct 59781 ATGCCCTGGCTCACCGGACAGCCCGGGTAAGTTTCATAAACGCCAATTTTCTCAGCGAGC 59722 Query 213198 TCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTC 213257 |||||| || | | ||| | ||||| |||||||| || |||| || | ||| Sbjct 59721 TCGCAGCTTGCTTCTAACGCACCATAGTAAATGGTTTCGAAAATCTGTTGATTCAACTTG 59662 Query 213258 -TTG--GCCTC---TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||| || || | ||| || |||||| | | || |||| |||| Sbjct 59661 ATTGCAGCTTCACTTTCATACGGGATACGCATCAGGACG------AAAGCATCGGCCAAT 59608 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA---CTTGGAGCACTCCTCC 213368 || || || ||||| ||||| || | || | || ||| || ||||| || || Sbjct 59607 CCTTGAACACCGATTCCGATCGGCCGATGCCGCATGTTTGAGTTCTTGG----CTTCTGG 59552 Query 213369 AAG-GGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGAC 213427 | ||||| ||||| || ||||| ||||| || || | | | | ||| ||||| Sbjct 59551 GATCGGGTAGAAGTTCACCTCTATGATTTTGTTTAGATTCTGCACGACGATTTTAGTGAC 59492 Query 213428 ATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGG-CAGGG 213486 | || | ||| || || | | | | | || || || || | ||| | Sbjct 59491 TTCTTTTAGCTTCTCAAAGTTATACGTTTTGTCATCAT--TG-ACGAA-TCTGTTCAGTG 59436 Query 213487 CGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGG 213546 ||| | |||| || || ||||| || || | | |||||||| | |||||| | Sbjct 59435 CGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCAACGATCTCCG 59376 Query 213547 TGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA- 213605 |||| || || |||||| ||| ||||||||||||| || || | ||| | | ||| Sbjct 59375 TGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATT-GCTTTTACTGTTGCAT 59317 Query 213606 GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTC 213665 | || ||||| |||||||| |||| |||||| || | || | | | || || Sbjct 59316 GCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATGATAGCCTTC 59257 Query 213666 CAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCG 213725 || | || || || ||| |||| ||| || | || || | || Sbjct 59256 CACAAA-ACTTGCGCTCT--CACTTGCCTCACATATCGTTTCTCTTGTTCATATCGCTCA 59200 Query 213726 TAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACAC 213785 || | || | ||| |||| |||||| | |||| || |||||| ||| ||| Sbjct 59199 TATAACTTCTCGAACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGTGGGGGCAC 59140 Query 213786 ATGAGGCTCCAGTCCCCGTCATCTCT-GACTCTCTGCATGAACAGGTCCGGGACCCACAG 213844 ||||||||||| || |||| |||| |||||| | |||||||| ||| || | ||| || Sbjct 59139 ATGAGGCTCCATTCGCCGTTG-CTCTCGACTCTTTTCATGAACAAGTCTGGTATCCAGAG 59081 Query 213845 CGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAG 213904 | | || || || || | | || ||| |||| |||||| ||||| | Sbjct 59080 CCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTGAGATCCAA 59021 Query 213905 AAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---T 213961 || ||||| || ||||||||||||||||| | ||||| || |||||||| || | | Sbjct 59020 GAACTCAAATATATCCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTCGTTT 58961 Query 213962 CTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAG 214021 || ||||| ||||| || ||| || |||| ||| ||| || | |||||| || Sbjct 58960 GTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAG 58901 Query 214022 CCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGC--TC 214079 |||||||| ||||||||||| || || || || || ||| | || ||| | Sbjct 58900 GCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGC---GGATGCAGTG 58844 Query 214080 ATGGAGAGC-CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTC 214138 | || | || || || || || | |||||||| | ||||| | | | || || Sbjct 58843 TACGTGAACGCCGATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTC 58784 Query 214139 CATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGG 214198 |||||| | |||||||| || | | | | | ||||||| ||||||||||| Sbjct 58783 GTAGATGCCCTCGATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTGGGG 58724 Query 214199 CCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAG 214258 | || || | | | ||| ||||||||||| || || | | |||| | || || Sbjct 58723 GCGGGGCGTGGCCGCCGAGAACAGCGTGGGGCTCGCGTGCGTGAAGTACTTCTCTGACAG 58664 Query 214259 GAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCT 214318 || |||| || | | | ||| |||||| | ||| | || || | | || Sbjct 58663 CAGGTTGTACGTGTTGATAGCGGAGTCGATGTCCTCGCCGTGAA--TGCCGATGGAAACT 58606 Query 214319 --CATCAGCATGTGCTGGGGCCTCTC 214342 |||||||||||||||||| | ||| Sbjct 58605 CGCATCAGCATGTGCTGGGGACGCTC 58580 >seq137 Length=194913 Score = 141 bits (156), Expect = 2e-28 Identities = 129/163 (79%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| ||||| |||||||| || || |||||||| || |||||| || || || Sbjct 27414 GTACATCTCTGAGTGTACATTCTCCATTGCAATCTGGAATCCATAGAAGCATCTTGCTTC 27473 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | |||||||||||| ||||||||||||| || ||||||||||| || ||||| || Sbjct 27474 AGTGACCTGCACTTCTTGAGAGAATCTCTCCACCAAGTTCTCATTGACAATGCCATCGGA 27533 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCG 48586 || || ||||| || ||||| ||||| | ||| || |||||| Sbjct 27534 GGCCGCGAAGAAAGCCAGGACGTGTTTGATGAAGTGCCGCTCG 27576 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247 ||||| ||||| | || | | || | |||||| || | |||||| ||| |||||| Sbjct 23408 AGACCGGGCATCAGACCGCGTTTCTTCATCCAGAATATAGACGCGAAGCTGCCCGAGAAG 23467 Query 48248 AAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT 48307 || |||||||| || | ||||| || || | ||| ||||| | || ||||| || Sbjct 23468 AATATGCCCTCGACGGATGCGAATGCCACGATGCGCTCGCCGAAGGTGGCCGTCTTG-CT 23526 Query 48308 GA-GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 | |||||| ||||||||||| ||||||||||||| ||| |||| |||||| | ||| Sbjct 23527 GCCGATCCACTGGAGCGCCCAGTCCGCCTTCTTCTTGACGCACGGCAGCGTCTCCACGGC 23586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931232369027840