Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq955 152 1e-31 >seq955 Length=106330 Score = 152 bits (168), Expect = 1e-31 Identities = 563/875 (64%), Gaps = 19/875 (2%) Strand=Plus/Minus Query 221698 GTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTAT 221757 ||| || || ||| |||| ||||||||||| || || ||| || |||| | Sbjct 59443 GTTCAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCAAC 59384 Query 221758 GATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCG 221817 |||||| || ||||| || ||||| ||||| || ||||||| || ||||| || | Sbjct 59383 GATCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACT 59324 Query 221818 ATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAAT 221877 ||| ||||| ||||| ||||| | || || || || | || || | | || Sbjct 59323 GTTGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATGAT 59264 Query 221878 CTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTT-TTCAT 221936 | ||| | || || ||||| |||| || | | | |||| ||||| Sbjct 59263 AGCCTTCCACAAAACTTGCGCTCTCACTTGCCTC---ACAT-ATCGTTTCTCTTGTTCAT 59208 Query 221937 ACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG 221996 | | ||| | | | || |||| || || | ||| ||||||| ||||| | Sbjct 59207 ATCGCTCATATAACTTCTCGAACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGT 59148 Query 221997 CGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGA 222056 ||| ||||| || ||||| | |||| | ||| || | |||||| | ||| || | Sbjct 59147 GGGGGCACATGAGGCTCCATTCGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTA 59088 Query 222057 TCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCA 222116 |||| ||| | | ||| || ||||| | || |||||| || |||||||| | | Sbjct 59087 TCCAGAGCCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTGA 59028 Query 222117 GATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGG 222176 ||||||| |||||||| || || |||||||||||||| || ||||| || | ||||||| Sbjct 59027 GATCCAAGAACTCAAATATATCCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGG 58968 Query 222177 GTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCG 222236 |||| ||||| || || || || || ||| | ||| ||| ||| || | | Sbjct 58967 GTCGTTTGTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGG 58908 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC----TC 222292 |||| || |||||||| |||||||| || ||||| | || ||| | | Sbjct 58907 GTACGAGGCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGC 58848 Query 222293 AGGTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTG 222352 || ||| | | ||||||||| || || ||| ||||| | ||||| ||| Sbjct 58847 AGTGTACGTG----AACGCCGATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTG 58792 Query 222353 AGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGAC 222412 || ||||| ||||||||| || ||| ||||| | | | || || || || || Sbjct 58791 AGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAG 58732 Query 222413 ATCTGAGATTTG---GTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAG 222469 | ||| | | |||| | | || ||||||||||| || ||||| || ||||| Sbjct 58731 AGCTGGGGGCGGGGCGTGG--CCGCCG-AGAACAGCGTGGGGCTCGCGTGCGTGAAGTAC 58675 Query 222470 CCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGC 222529 | |||| ||| | |||||| | | | | |||||| || |||||||| Sbjct 58674 TTCTCTGACAGCAGGTTGTACGTGTTGATAGCGGAGTCGATGTCCTCGCCGTGAATGCCG 58615 Query 222530 ATGGCGCATCTCATGTACATGTACTGGGGCCTCTC 222564 |||| || ||| ||||| |||||| | ||| Sbjct 58614 ATGGAAACTCGCATCAGCATGTGCTGGGGACGCTC 58580 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 |||||| || ||||| || ||||| || ||||| | |||||| | |||||| || || || Sbjct 60001 GTTCACGACCTGGAACTCGCCCGACAGGACCCTGCGCTGGTAGATGTTAGACGTAAAAGG 59942 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGC 221232 |||| | |||||| ||||| ||||| || || ||| |||||||||||| ||||| Sbjct 59941 CTCGAAGGACTCGTTATTGCCGAGGATTTGTGCGGTGGAGGCGGTGGGCATCGGTGC 59885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928545235941440