Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq955 152 1e-31
>seq955
Length=106330
Score = 152 bits (168), Expect = 1e-31
Identities = 563/875 (64%), Gaps = 19/875 (2%)
Strand=Plus/Minus
Query 221698 GTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTAT 221757
||| || || ||| |||| ||||||||||| || || ||| || |||| |
Sbjct 59443 GTTCAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCAAC 59384
Query 221758 GATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCG 221817
|||||| || ||||| || ||||| ||||| || ||||||| || ||||| || |
Sbjct 59383 GATCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACT 59324
Query 221818 ATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAAT 221877
||| ||||| ||||| ||||| | || || || || | || || | | ||
Sbjct 59323 GTTGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATGAT 59264
Query 221878 CTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTT-TTCAT 221936
| ||| | || || ||||| |||| || | | | |||| |||||
Sbjct 59263 AGCCTTCCACAAAACTTGCGCTCTCACTTGCCTC---ACAT-ATCGTTTCTCTTGTTCAT 59208
Query 221937 ACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG 221996
| | ||| | | | || |||| || || | ||| ||||||| ||||| |
Sbjct 59207 ATCGCTCATATAACTTCTCGAACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGT 59148
Query 221997 CGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGA 222056
||| ||||| || ||||| | |||| | ||| || | |||||| | ||| || |
Sbjct 59147 GGGGGCACATGAGGCTCCATTCGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTA 59088
Query 222057 TCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCA 222116
|||| ||| | | ||| || ||||| | || |||||| || |||||||| | |
Sbjct 59087 TCCAGAGCCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTGA 59028
Query 222117 GATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGG 222176
||||||| |||||||| || || |||||||||||||| || ||||| || | |||||||
Sbjct 59027 GATCCAAGAACTCAAATATATCCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGG 58968
Query 222177 GTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCG 222236
|||| ||||| || || || || || ||| | ||| ||| ||| || | |
Sbjct 58967 GTCGTTTGTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGG 58908
Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC----TC 222292
|||| || |||||||| |||||||| || ||||| | || ||| | |
Sbjct 58907 GTACGAGGCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGC 58848
Query 222293 AGGTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTG 222352
|| ||| | | ||||||||| || || ||| ||||| | ||||| |||
Sbjct 58847 AGTGTACGTG----AACGCCGATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTG 58792
Query 222353 AGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGAC 222412
|| ||||| ||||||||| || ||| ||||| | | | || || || || ||
Sbjct 58791 AGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAG 58732
Query 222413 ATCTGAGATTTG---GTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAG 222469
| ||| | | |||| | | || ||||||||||| || ||||| || |||||
Sbjct 58731 AGCTGGGGGCGGGGCGTGG--CCGCCG-AGAACAGCGTGGGGCTCGCGTGCGTGAAGTAC 58675
Query 222470 CCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGC 222529
| |||| ||| | |||||| | | | | |||||| || ||||||||
Sbjct 58674 TTCTCTGACAGCAGGTTGTACGTGTTGATAGCGGAGTCGATGTCCTCGCCGTGAATGCCG 58615
Query 222530 ATGGCGCATCTCATGTACATGTACTGGGGCCTCTC 222564
|||| || ||| ||||| |||||| | |||
Sbjct 58614 ATGGAAACTCGCATCAGCATGTGCTGGGGACGCTC 58580
Score = 98.7 bits (108), Expect = 2e-15
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
|||||| || ||||| || ||||| || ||||| | |||||| | |||||| || || ||
Sbjct 60001 GTTCACGACCTGGAACTCGCCCGACAGGACCCTGCGCTGGTAGATGTTAGACGTAAAAGG 59942
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGC 221232
|||| | |||||| ||||| ||||| || || ||| |||||||||||| |||||
Sbjct 59941 CTCGAAGGACTCGTTATTGCCGAGGATTTGTGCGGTGGAGGCGGTGGGCATCGGTGC 59885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928545235941440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |