Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq754 217 1e-51 seq3754 104 2e-17 seq3664 104 2e-17 seq4530 91.5 1e-13 >seq754 Length=177731 Score = 217 bits (240), Expect = 1e-51 Identities = 778/1203 (65%), Gaps = 31/1203 (3%) Strand=Plus/Plus Query 105819 GTTCATGGCATTGAGTAAATCGCCGTTATCGGCATCTATTTCCCAAGCAAACAAACCGCC 105878 |||||||||||| | || |||||||| || || ||||||||||| || |||| ||| || Sbjct 50419 GTTCATGGCATTCAATATGTCGCCGTTGTCCGCGTCTATTTCCCAGGCGAACAGACCCCC 50478 Query 105879 CAGTTTGTT-TCGATCGACATATTTAACCTTGCCCAAAACAGAA-TCGACGCTATCAAAC 105936 ||| || || | || |||||||| ||||| | | || ||| || || || Sbjct 50479 CAGCTTATTATTTCTC-ACATATTTCCCCTTGGCAATCGTCGACCTCG-CGTCGTCGTAC 50536 Query 105937 GAAATTAAATCCNNNNNNNNNNNNNCAAAAACGTACGAAGCTTGAGCGACATTGTCAAAC 105996 | || | |||| || ||||| | ||||| || ||| |||| | Sbjct 50537 GTGATAAGATCCCCCGTAGCCTCTCTGAACACGTAGGGAGCTTCTGCAACACTGTCGTAT 50596 Query 105997 GTGTACACGTACGTG--TTCAG---TTTTGTTTGA-ATCTGTCGGTAATCTACGACGCCG 106050 ||| | | || || || ||| ||| | |||| || ||| || ||||| || Sbjct 50597 CGATACTCCCATTTGCCTTGAGCGATTTCGTTCGCTATCTCTCTGTAGTCAACGACTCCA 50656 Query 106051 TCCTCCCAAGTGCCC--GACACGGGCCCGTTGCCGATTCCCGAAAAATAGTTGTTGCCAG 106108 |||| ||||||||| |||| || || || || | | || | || ||| ||||| Sbjct 50657 TCCTGCCAAGTGCCTTTGACA-GGTCCTGTAGC-GTTCCCAGTGAAGGGGTTCTTGCCTT 50714 Query 106109 TATAATTGGTCACGCCCGTCCACCCGCGGCCGTACATGGCAACTCCTACGATTATTTTGT 106168 ||| | | || || ||||| || ||||||||||| ||||| ||||||| || || | Sbjct 50715 CATAGTCGTGAACTCCAGTCCATCCTCGGCCGTACATAGCAACACCTACGACAATCTTCT 50774 Query 106169 TGGGATCGACGTCTTGTTTCAGCAACGCATCGACCGCGTAATGTGTTGTGTATTTTTCTT 106228 |||| | || |||| |||| | || | ||| || ||||| | || | Sbjct 50775 TGGGGTTAACACCTTGAGCGAGCAGGAATTTCACTCCAAAATCAGTGGTGTAAGTCTCCT 50834 Query 106229 CGGAATTCCAACTAGGCGCATATACCGTCGTTTGATAGCCCAG---ATCTGTGTTCGACC 106285 || |||| ||| || || | | || || | || || ||| || |||| Sbjct 50835 TGGGCATCCACGCAGGAGCGTACAGAGATGTCTGGTGTCCGAGGGTATCA---TTAGACC 50891 Query 106286 ACGCCCCTTTAAAATCGTAACTCATGAGGAAAATTTTGTCCAAATATTTTTGTGCGTCGT 106345 | || |||||||| ||||| ||||| ||||| || | ||||| || || || || || Sbjct 50892 AGGCTCCTTTAAAGTCGTAGCTCATCAGGAAGATATGGTCCATGTACTTCTGGGCAGCGC 50951 Query 106346 TATAGTTTACCACGGCAATTTTGTCGTAGCCCGCGCTTATAGCGCTGGTTAATTCGTAGA 106405 | |||| ||||| || ||||| | || || || || ||| || | ||||| Sbjct 50952 TGTAGTCGACCACTTGGATCTTGTCCCAACCGGCACTGATGGCGGAAGTCAGCTCGTATT 51011 Query 106406 ATTTGCCCGTTTGCAGTTC-TAATTCGTCTAGCATGGCGCGCAACTCTTGCAACAGCACG 106464 || || |||| ||| || || | |||||| | || | || | || || | Sbjct 51012 TCTTACCAGTTT-CAGCGGATAGCTCATTGAGCATGTCACGTATTTCCTTCATGAGTTCA 51070 Query 106465 ACATATGTTTCGGCGTCGCGTTCCGCATCGCC--CAAAGA-AGGATTGGCCCCTTTGCCG 106521 || || | | | || ||| || ||| ||| | ||| ||||| |||||||| Sbjct 51071 ACGTA------GACATGGCCGTCCTCAGGGCCTCCAAGGTCAGGGTTGGCACCTTTGCCT 51124 Query 106522 CCTGGAAATTCCCAATCTATATCGACGCCATCAAAAAATTTCCAAACTTGCAAAAATTCC 106581 || || || |||||||| ||||| || ||||| || ||||||||| ||||| || || Sbjct 51125 CCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCAAGTTTGCAGGAAGTCT 51184 Query 106582 TTTACAGAATTTACAAACACGTTTCTTTTTTCAACGTCATGCATAAAATAGAAGGGGTCT 106641 || || || || || || ||| || ||||| | ||| |||| || || Sbjct 51185 TTCACCGATGCGACGAAACGGTCTCTCTTGGTCTTGTCATTTAAGAAAAAGAATGGATCA 51244 Query 106642 GATAGCGTCCAACCGCCTATAGACGGAAGCACTTTTAAATGCGGATTTGCCAATTTAGCC 106701 | || ||||| || || || || || || | ||| | | || || || ||| | Sbjct 51245 GCCAGGGTCCAGCCACCGATGGATGGGAGGATTTTCAGGTCAGGTTTCGCTTGTTTCAAC 51304 Query 106702 GCCATCAACTGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACACGCCTTTTTGC 106761 ||| | ||| || || || || |||||||| |||||||||| |||| ||||| || Sbjct 51305 ATCATGAGCTGGCCGAAATTGCCTTTGTAAGGTTCGTTCCAAGAAGACAGACCTTTCTGG 51364 Query 106762 GGCTTCTGTATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGGCGCGCCCTTTG 106821 || ||||| | ||| ||||| ||||| || || | ||||| || || | || || || Sbjct 51365 GGTTTCTGCAAGGCTGCCCATGGATCATGGATTGTCACTTTGAAGTCCTCTCGGCCGCTG 51424 Query 106822 CATGATTTTTGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCATCGTTTATTCCA 106881 || || ||||| || || ||||| || || || || ||||| || ||| Sbjct 51425 CAGGAACGTTGCAGAGCTTGGAAACTGCCTTCGATCTCCTTCAAACTGTCGTTAATGCCA 51484 Query 106882 TCACCGCCGCAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGGGCAGCGGGACT 106941 ||||| ||||| || || || |||||||||| | ||| | | ||| || | |||| Sbjct 51485 TCACCTCCGCAAATTGGGATGAAACCGTACAGGAGATGCGTGAGATTTGGTACTGGGATA 51544 Query 106942 TTATCTACGGGAAAATTGCGGCCATACACGCCCCATTCGACAAAATACGCGGCGACAGTT 107001 || || ||||| || | | ||||||||||||||||| || || || | ||| | Sbjct 51545 CGGTCCACTGGAAACTTTCTGGGGTACACGCCCCATTCGACGAAGTAAGCTCCCACAACT 51604 Query 107002 TTG 107004 ||| Sbjct 51605 TTG 51607 >seq3754 Length=50117 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | || ||||||||||| || |||| ||| ||||| Sbjct 772 ATGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 831 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | ||||| ||||| ||||| || || | ||| || || Sbjct 832 GACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAGGAAGGCATCCCCCCCGACCAG 891 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||||| ||||| || || |||||| | |||||| || | ||||||| ||| Sbjct 892 CAGAGACTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTCTCCGATTACAAC 951 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || |||||||||||||| || ||| ||||||| Sbjct 952 ATCCAAAAAGAATCTACCCTCCACTTGGTATT 983 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || ||||||||||| || ||| ||| |||| Sbjct 316 ATGCAGATCTTTGTGAAGACCCTCACAGGTAAAACCATCACACTTGAAGTAGAAGCTTCG 375 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| |||||||| ||| | ||| ||| ||| Sbjct 376 GACACCATTGAAAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCCCCAGACCAA 435 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| || | ||||| || || |||||| | |||||| || | | ||||| || Sbjct 436 CAGCGATTGATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTTTCTGATTACAAT 495 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || || |||||||| ||||| ||| ||||||| Sbjct 496 ATCCAGAAAGAATCCACTCTTCACTTGGTATT 527 >seq3664 Length=101255 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | || ||||||||||| || |||| ||| ||||| Sbjct 95234 ATGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 95293 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || ||||| ||||| || || || || | ||| ||| || Sbjct 95294 GACACCATTGAGAATGTCAAGGCTAAAATTCAAGATAAGGAAGGCATCCCCCCAGACCAG 95353 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||||| |||||||| || || ||| | |||||| ||| | |||| || ||| Sbjct 95354 CAGAGACTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACTCTCTCCGACTACAAC 95413 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || |||||||||||||| || || ||||||| Sbjct 95414 ATCCAAAAAGAATCTACCCTCCATCTGGTATT 95445 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || ||||||||||| || |||| ||| ||||| Sbjct 94094 ATGCAGATCTTTGTGAAGACCCTCACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 94153 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | ||||| ||||| ||||| || || | ||| || || Sbjct 94154 GACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAGGAAGGCATCCCCCCCGACCAG 94213 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||||| ||||| || || |||||| | |||||| || | ||||||| ||| Sbjct 94214 CAGAGACTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTCTCCGATTACAAC 94273 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || |||||||||||||| || ||| ||||||| Sbjct 94274 ATCCAAAAAGAATCTACCCTCCACTTGGTATT 94305 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || ||||||||||| || ||| ||| |||| Sbjct 94778 ATGCAGATCTTTGTGAAGACCCTCACAGGTAAAACCATCACACTTGAAGTAGAAGCTTCG 94837 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| |||||||| ||| | ||| ||| ||| Sbjct 94838 GACACCATTGAAAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCCCCAGACCAA 94897 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| || | ||||| || || |||||| | |||||| || | | ||||| || Sbjct 94898 CAGCGATTGATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTTTCTGATTACAAT 94957 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || || |||||||| ||||| ||| ||||||| Sbjct 94958 ATCCAGAAAGAATCCACTCTTCACTTGGTATT 94989 >seq4530 Length=43051 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || ||||| || || || |||||||||||||| || ||| |||| Sbjct 13005 ATGCAGATCTTCGTAAAGACTTTGACTGGTAAAACCATTACTCTTGAGGTTGAAGCTTCC 12946 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| |||||||| || | ||| || || Sbjct 12945 GATACCATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCGGACCAG 12886 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||||||||||||||| || ||||| | |||||| || || | || || ||| Sbjct 12885 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 12826 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTA 28763 || || || || |||||||| ||| ||||| Sbjct 12825 ATCCAGAAGGAGTCTACTCTACACTTGGTA 12796 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || || || |||||||||||||| || || |||| Sbjct 13461 ATGCAGATCTTCGTTAAGACCTTGACCGGTAAAACCATTACTCTTGAGGTTGAGGCTTCC 13402 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| ||||||||||| | ||| || || Sbjct 13401 GATACTATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAGGGCATTCCCCCGGACCAG 13342 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||||||||||||||| || ||||| | |||||| || || | || || ||| Sbjct 13341 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 13282 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||||| ||||| || || || ||| | ||||| Sbjct 13281 ATTCAGAAAGAGTCCACCCTTCACTTAGTATT 13250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425271031593579