Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq4530 122 1e-22
seq3664 89.7 8e-13
>seq4530
Length=43051
Score = 122 bits (134), Expect = 1e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || ||||||| | ||||| |||||||| || || ||||| || | |||
Sbjct 12320 ATGCAAATTTTCGTTAAAACTCTAACTGGCAAAACTATAACTTTGGAAGTTGAGGCCTCT 12261
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| ||| ||||| || ||||||||||| || |||||||| ||
Sbjct 12260 GACACTATTGAGAACGTAAAAGCCAAAATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 12201
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||| | |||| || || |||||||| |||||| | ||| |||| || || ||
Sbjct 12200 CAGAGACTTATTTTCGCTGGCAAGCAGCTAGAAGATGGACGCACTCTATCTGACTACAAC 12141
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032
|| ||||| | || ||||| || |||
Sbjct 12140 ATTCAGAAAGAATCAACCCTTCACTTGGTG 12111
Score = 107 bits (118), Expect = 3e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | |||||| ||||||| || || || ||| | || || |||| |||
Sbjct 13689 ATGCAGATCTTCGTAAAAACACTGACTGGCAAGACAATCACACTTGAGGTTGAAGCTTCA 13630
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || || ||||| || || || |||||||| || || || ||
Sbjct 13629 GATACCATTGAGAATGTAAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCGGACCAG 13570
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||| | || | |||||| || ||||| |||||| | | || | ||||| || ||
Sbjct 13569 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 13510
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
|| |||||| |||| ||||||||||| ||
Sbjct 13509 ATTCAGAAAGAGTCGACCCTTCATTTAGTATT 13478
Score = 104 bits (114), Expect = 3e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | |||||| ||||||| || || || || | || || || | ||
Sbjct 12092 ATGCAGATCTTTGTAAAAACACTGACTGGCAAGACCATCACTCTTGAGGTAGAGGCCTCC 12033
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || ||| ||||| ||||||||||| || || |||||||| ||
Sbjct 12032 GATACAATTGAGAATGTAAAAGCCAAAATCCAAGATAAAGAGGGTATTCCTCCAGACCAG 11973
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||| | || | ||| || |||||||| |||||| | || ||||| || || ||
Sbjct 11972 CAGAGACTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCTTATCGGACTACAAC 11913
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032
|| |||||| | || ||||| || |||
Sbjct 11912 ATTCAGAAAGAGTCAACCCTTCACTTGGTG 11883
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || |||||||| || || |||||| | || || |||| |||
Sbjct 12548 ATGCAGATCTTCGTAAAGACTTTGACTGGCAAGACCATTACACTTGAGGTTGAAGCTTCC 12489
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || ||| |||||| || || || |||||||| || ||||| ||
Sbjct 12488 GATACGATTGAGAATGTTAAAGCTAAAATCCAGGACAAGGAAGGCATCCCCCCAGACCAG 12429
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | || | ||||| ||||| || ||||| | || | || || || ||
Sbjct 12428 CAGCGTCTTATCTTCGCCGGAAAGCAACTGGAAGACGGACGCACACTGTCCGACTACAAC 12369
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
|| |||||| |||||||||||||||| ||
Sbjct 12368 ATTCAGAAAGAGTCGACGCTTCATTTAGTATT 12337
Score = 89.7 bits (98), Expect = 8e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || |||||||| ||||| ||||| | || || |||| |||
Sbjct 13005 ATGCAGATCTTCGTAAAGACTTTGACTGGTAAAACCATTACTCTTGAGGTTGAAGCTTCC 12946
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || || ||||| || || ||||||||||| || || || ||
Sbjct 12945 GATACCATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCGGACCAG 12886
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||| | || | |||||| || ||||| |||||| | | || | ||||| || ||
Sbjct 12885 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 12826
Query 156003 AT 156004
||
Sbjct 12825 AT 12824
Score = 84.2 bits (92), Expect = 3e-11
Identities = 147/213 (69%), Gaps = 1/213 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || |||| || |||||||| || || || ||| | || || |||| |||
Sbjct 12777 ATGCAGATCTTCGTTAAGACCTTGACTGGCAAGACCATCACACTTGAGGTTGAAGCTTCC 12718
Query 155883 GATAATATTTTAAACGTGAAAAAT-AAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| ||| || || ||| ||||| || || || |||||||| || ||||| ||
Sbjct 12717 GATACCATTGAGAATGTTAAAGGCCAAAATCCAGGACAAGGAAGGCATCCCCCCAGACCA 12658
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|| | | || | ||||| ||||| || ||||| | || | || || || ||
Sbjct 12657 GCAGCGTCTTATCTTCGCCGGAAAGCAACTGGAAGACGGACGCACACTGTCGGACTACAA 12598
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
|| |||||| |||| ||||||||||| ||
Sbjct 12597 CATTCAGAAAGAGTCGACCCTTCATTTAGTATT 12565
>seq3664
Length=101255
Score = 89.7 bits (98), Expect = 8e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| |||||| | || || |||| || ||||| || || || || ||||| | ||
Sbjct 93638 ATGCAGATATTTGTGAAGACCCTGACGGGCAAAACAATCACTTTGGAGGTCGAGGCGTCG 93697
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| || ||||||||||| || || ||||| || ||||| |||
Sbjct 93698 GACACCATTGAGAACGTCAAGGCGAAAATACAAGACAAGGAGGGCATTCCACCAGACCAA 93757
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | ||||| | || || ||||| || |||||| | || | || ||||| |||
Sbjct 93758 CAGCGTTTGATCTTCGCTGGAAAGCAACTTGAAGATGGGCGCACCCTCTCTGATTACAAT 93817
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034
|| ||||| | || ||||| || || ||
Sbjct 93818 ATCCAGAAAGAATCCACTCTTCACTTGGTATT 93849
Score = 89.7 bits (98), Expect = 8e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || |||| || ||||| || ||| | ||||| |||| |||
Sbjct 93866 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACACTCGAAGTAGAAGCTTCG 93925
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || || |||||| ||||| || ||||||||||| ||||| ||
Sbjct 93926 GACACCATCGAGAATGTCAAGGCTAAAATTCAAGACAAGGAAGGCATACCCCCAGACCAG 93985
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||| | || | ||| || ||||| || |||||| | | || | || || || |||
Sbjct 93986 CAGAGACTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACCCTCTCCGACTACAAT 94045
Query 156003 AT 156004
||
Sbjct 94046 AT 94047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731635962131600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |