Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq311 113 1e-19
seq955 95.1 4e-14
>seq311
Length=189715
Score = 113 bits (124), Expect = 1e-19
Identities = 192/273 (70%), Gaps = 8/273 (3%)
Strand=Plus/Plus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| ||| || ||||||||||||||||| |||||| | ||||||||||| |||
Sbjct 153395 TCCATAGCCTTTATCAAACGACGCTGAATATATCCAGTTTCGGCAGTTTTTACAGCAGTA 153454
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693
||||| ||||| ||||||| |||||||| ||||| | | |||| ||| ||| | ||
Sbjct 153455 TCAATAAGACCTTCACGACCTCCCATAGCGTGGAAATAGAACTCTGACGG-CGTCAATCC 153513
Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750
| | | | || | || ||||| || | || ||| || || ||||||| ||| |
Sbjct 153514 GGCGAGATACGAATTTTCTACGAAGCCTCTCGACTCAGGACCGTAATCGTC---TTTGAT 153570
Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810
|| || || || || | || | || |||| ||||| || || |||||||| ||
Sbjct 153571 GAAATGCGGTAGAGTTCGTTTACGGAATCCAAATGGAATACGTTTACCTTCAACGTTTTG 153630
Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|| || | || | ||| | ||| ||||| ||
Sbjct 153631 TTGACCTACACAAGCAATAACCTGAGAAATGTT 153663
>seq955
Length=106330
Score = 95.1 bits (104), Expect = 4e-14
Identities = 229/340 (67%), Gaps = 10/340 (3%)
Strand=Plus/Minus
Query 155406 TCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCC---TGTAATTGCTCCTGCTT 155462
||||| || || ||||| || || |||| || ||||||| ||| ||| | |||
Sbjct 59616 TCGGCCAATCCTTGAACACCGATTCCGATCGGCCGATGCCGCATGT--TTGAG--TTCTT 59561
Query 155463 GTCTTCTTGTTT-GGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATAC 155521
| ||||| | | ||||| || ||||| || || || || |||| ||| || | |
Sbjct 59560 GGCTTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTGTTTAGATTCTGCACGACGAT 59501
Query 155522 CTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACC 155581
|| || || ||| || ||| || ||| | | ||||| || ||||| || || |
Sbjct 59500 TTTAGTGACTTCTTTTAGCTTCTCAAAGTTATACGTTTTGTCATCATTGACGAATCTGTT 59441
Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAA 155640
|| | | ||||||| |||||| || ||| || | | || || |||| || || |
Sbjct 59440 CAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACG-TGTACTCAACGA 59382
Query 155641 TCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGT 155700
|||| ||| || ||| | ||||| ||||| | ||||| || || ||||||||
Sbjct 59381 TCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGT 59322
Query 155701 TACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTC 155740
| || || || ||||| || ||||||||||| || || ||
Sbjct 59321 TGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTC 59282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471331053436937
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |