Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq311 113 1e-19 seq955 95.1 4e-14 >seq311 Length=189715 Score = 113 bits (124), Expect = 1e-19 Identities = 192/273 (70%), Gaps = 8/273 (3%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || ||||||||||||||||| |||||| | ||||||||||| ||| Sbjct 153395 TCCATAGCCTTTATCAAACGACGCTGAATATATCCAGTTTCGGCAGTTTTTACAGCAGTA 153454 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 ||||| ||||| ||||||| |||||||| ||||| | | |||| ||| ||| | || Sbjct 153455 TCAATAAGACCTTCACGACCTCCCATAGCGTGGAAATAGAACTCTGACGG-CGTCAATCC 153513 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750 | | | | || | || ||||| || | || ||| || || ||||||| ||| | Sbjct 153514 GGCGAGATACGAATTTTCTACGAAGCCTCTCGACTCAGGACCGTAATCGTC---TTTGAT 153570 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 || || || || || | || | || |||| ||||| || || |||||||| || Sbjct 153571 GAAATGCGGTAGAGTTCGTTTACGGAATCCAAATGGAATACGTTTACCTTCAACGTTTTG 153630 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || | || | ||| | ||| ||||| || Sbjct 153631 TTGACCTACACAAGCAATAACCTGAGAAATGTT 153663 >seq955 Length=106330 Score = 95.1 bits (104), Expect = 4e-14 Identities = 229/340 (67%), Gaps = 10/340 (3%) Strand=Plus/Minus Query 155406 TCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCC---TGTAATTGCTCCTGCTT 155462 ||||| || || ||||| || || |||| || ||||||| ||| ||| | ||| Sbjct 59616 TCGGCCAATCCTTGAACACCGATTCCGATCGGCCGATGCCGCATGT--TTGAG--TTCTT 59561 Query 155463 GTCTTCTTGTTT-GGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATAC 155521 | ||||| | | ||||| || ||||| || || || || |||| ||| || | | Sbjct 59560 GGCTTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTGTTTAGATTCTGCACGACGAT 59501 Query 155522 CTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACC 155581 || || || ||| || ||| || ||| | | ||||| || ||||| || || | Sbjct 59500 TTTAGTGACTTCTTTTAGCTTCTCAAAGTTATACGTTTTGTCATCATTGACGAATCTGTT 59441 Query 155582 AAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAA 155640 || | | ||||||| |||||| || ||| || | | || || |||| || || | Sbjct 59440 CAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACG-TGTACTCAACGA 59382 Query 155641 TCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGT 155700 |||| ||| || ||| | ||||| ||||| | ||||| || || |||||||| Sbjct 59381 TCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGT 59322 Query 155701 TACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTC 155740 | || || || ||||| || ||||||||||| || || || Sbjct 59321 TGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTC 59282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471331053436937