Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq955 214 2e-49 seq11207 150 2e-30 seq137 127 2e-23 >seq955 Length=106330 Score = 214 bits (236), Expect = 2e-49 Identities = 205/263 (78%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||||||||| | || |||| |||| |||||||||||||||| |||||||||||||| Sbjct 58950 TGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAG 58891 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 |||||||||| || || | ||||| || |||||| | ||| || || |||| Sbjct 58890 ACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGCAGTGTACGTGAACGCCG 58831 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || ||||| || || ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 58830 ATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCG 58771 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || |||| |||||||| | | ||| ||||| || ||| || ||| | | |||| | Sbjct 58770 ATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTGGGGGCGGGGCGTGGCC 58711 Query 1630306 GCGTTGAAGAGCGTGGGCGTCGC 1630328 || ||| |||||||| |||| Sbjct 58710 GCCGAGAACAGCGTGGGGCTCGC 58688 >seq11207 Length=11417 Score = 150 bits (166), Expect = 2e-30 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| ||| | || | ||||| |||||| | ||| | | | || Sbjct 5144 GCTTGGCGAGCTCGCCGGGCAGCAGGAGCCTCACGGAGGTCTGCACCTCCCTGGAGGTGA 5203 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| |||||||||| ||| ||||||| | ||||||| |||| | Sbjct 5204 TCGTAGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGGCGGCGATGCGTTCGAAGA 5263 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||| ||||||| ||||| | ||| ||||||| || ||| |||| Sbjct 5264 TGTCGTTCACGAACGAATTCATGATGGACATGGCCTTACTGGAGATTCCGGTGTCAGGGT 5323 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | ||||||||||| |||||||||||| Sbjct 5324 GGACCTGCTTGAGAACCTTGTAGATG 5349 >seq137 Length=194913 Score = 127 bits (140), Expect = 2e-23 Identities = 163/221 (74%), Gaps = 9/221 (4%) Strand=Plus/Plus Query 869181 CTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCT 869240 ||||||| ||| |||||| || ||||| || | || |||||||| || ||||| |||| Sbjct 23373 CTTCGTCACGAGAGATCATCTCATTGCTGAATGTCAGACCGGGCATCAGACCGCGTTTCT 23432 Query 869241 TGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 | | ||| || || | ||| ||| ||||||||||| || ||||||||||||| || || Sbjct 23433 TCATCCAGAATATAGACGC-GAAGCTGCCCGAGAAGAATATGCCCTCGACGGATGCGAAT 23491 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCT--TGTTGATCCACTTCATCGCCC 869357 | | || |||||| | ||||| |||| || | || |||||||| | ||||| Sbjct 23492 GCCACGATGCGCTCGCCGAAGGT-----GGCCGTCTTGCTGCCGATCCACTGGAGCGCCC 23546 Query 869358 AGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG 869398 |||| ||||| ||| | || |||||| ||| || | |||| Sbjct 23547 AGTCCGCCTTCTTCTTGACGCACGGCAGCGTCTCCACGGCG 23587 Score = 89.7 bits (98), Expect = 6e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 869825 AGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACT 869884 |||||||| |||||| ||||||||| || ||||| |||||||||||||| ||||| | Sbjct 28314 AGGTCCACTTCCTCGACGGTCCAGAATGAAGCCTCAGCCTTTTTGTACATTTCCCAGATG 28373 Query 869885 TGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 | |||| |||||||||| | ||||| ||| |||||||| Sbjct 28374 TCAGGGTACTGGATAGGGAACACCACAAATCGGCGCGGGTTGTC 28417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105021849113917