Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq955 214 2e-49
seq11207 150 2e-30
seq137 127 2e-23
>seq955
Length=106330
Score = 214 bits (236), Expect = 2e-49
Identities = 205/263 (78%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||| | || |||| |||| |||||||||||||||| ||||||||||||||
Sbjct 58950 TGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAG 58891
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
|||||||||| || || | ||||| || |||||| | ||| || || ||||
Sbjct 58890 ACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGCAGTGTACGTGAACGCCG 58831
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| ||||| || || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 58830 ATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCG 58771
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
|| |||| |||||||| | | ||| ||||| || ||| || ||| | | |||| |
Sbjct 58770 ATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTGGGGGCGGGGCGTGGCC 58711
Query 1630306 GCGTTGAAGAGCGTGGGCGTCGC 1630328
|| ||| |||||||| ||||
Sbjct 58710 GCCGAGAACAGCGTGGGGCTCGC 58688
>seq11207
Length=11417
Score = 150 bits (166), Expect = 2e-30
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| ||| | || | ||||| |||||| | ||| | | | ||
Sbjct 5144 GCTTGGCGAGCTCGCCGGGCAGCAGGAGCCTCACGGAGGTCTGCACCTCCCTGGAGGTGA 5203
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
|||| ||||||||| |||||||||| ||| ||||||| | ||||||| |||| |
Sbjct 5204 TCGTAGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGGCGGCGATGCGTTCGAAGA 5263
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||| ||||||| ||||| | ||| ||||||| || ||| ||||
Sbjct 5264 TGTCGTTCACGAACGAATTCATGATGGACATGGCCTTACTGGAGATTCCGGTGTCAGGGT 5323
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| ||||||||||| ||||||||||||
Sbjct 5324 GGACCTGCTTGAGAACCTTGTAGATG 5349
>seq137
Length=194913
Score = 127 bits (140), Expect = 2e-23
Identities = 163/221 (74%), Gaps = 9/221 (4%)
Strand=Plus/Plus
Query 869181 CTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCT 869240
||||||| ||| |||||| || ||||| || | || |||||||| || ||||| ||||
Sbjct 23373 CTTCGTCACGAGAGATCATCTCATTGCTGAATGTCAGACCGGGCATCAGACCGCGTTTCT 23432
Query 869241 TGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
| | ||| || || | ||| ||| ||||||||||| || ||||||||||||| || ||
Sbjct 23433 TCATCCAGAATATAGACGC-GAAGCTGCCCGAGAAGAATATGCCCTCGACGGATGCGAAT 23491
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCT--TGTTGATCCACTTCATCGCCC 869357
| | || |||||| | ||||| |||| || | || |||||||| | |||||
Sbjct 23492 GCCACGATGCGCTCGCCGAAGGT-----GGCCGTCTTGCTGCCGATCCACTGGAGCGCCC 23546
Query 869358 AGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG 869398
|||| ||||| ||| | || |||||| ||| || | ||||
Sbjct 23547 AGTCCGCCTTCTTCTTGACGCACGGCAGCGTCTCCACGGCG 23587
Score = 89.7 bits (98), Expect = 6e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 869825 AGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACT 869884
|||||||| |||||| ||||||||| || ||||| |||||||||||||| ||||| |
Sbjct 28314 AGGTCCACTTCCTCGACGGTCCAGAATGAAGCCTCAGCCTTTTTGTACATTTCCCAGATG 28373
Query 869885 TGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928
| |||| |||||||||| | ||||| ||| ||||||||
Sbjct 28374 TCAGGGTACTGGATAGGGAACACCACAAATCGGCGCGGGTTGTC 28417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6105021849113917
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |