Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq754 210 2e-49 seq262 152 4e-32 seq4530 107 2e-18 seq3754 84.2 2e-11 >seq754 Length=177731 Score = 210 bits (232), Expect = 2e-49 Identities = 642/974 (66%), Gaps = 39/974 (4%) Strand=Plus/Minus Query 28809 GCGTATTTTGTGGAATGGAGCGTGTACGGCCGCAACTTTTCGGTGGACAAGGTGCCGCTG 28868 || || || || |||||| |||||||| | | || ||| | |||||| | || | Sbjct 51594 GCTTACTTCGTCGAATGGGGCGTGTACCCCAGAAAGTTTCCAGTGGACCGTATCCCAGTA 51535 Query 28869 CCCAACCTCTCGCATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGGGCTCAAC 28928 || || ||| ||||||| | ||||| ||| | || |||||||| || || || | ||| Sbjct 51534 CCAAATCTCACGCATCTCCTGTACGGTTTCATCCCAATTTGCGGAGGTGATGGCATTAAC 51475 Query 28929 GACGCCCTTAAAACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTCGTGCAACGGCCGT 28988 ||| | || || || ||||| |||| ||||||||||| |||| |||||| Sbjct 51474 GACAGTTTGAAGGAGATCGAAGGCAGTTTCCAAGCTCTGCAACGTTCCTGCAGCGGCCGA 51415 Query 28989 TCAGATTTTAAAGTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCAAAAGGGC 29048 || || ||||| | || || ||||| ||||| || | || ||||| || || || Sbjct 51414 GAGGACTTCAAAGTGACAATCCATGATCCATGGGCAGCCTTGCAGAAACCCCAGAAAGGT 51355 Query 29049 GTGTCTGCGTGGAACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATG--GCTGCCAAGT 29106 ||||| | |||||||| || ||||||||||||||||| ||||||||| | || || Sbjct 51354 CTGTCTTCTTGGAACGAACCTTACAAAGGCAATTTCGGCCAGCTCATGATGTTG--AAAC 51297 Query 29107 TGGCCAATCCACACATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCCGACC--- 29163 || || || || | ||||| || || ||||| || |||||||| || | || | Sbjct 51296 AAGCGAAACCTGACCTGAAAATCCTCCCATCCATCGGTGGCTGGACCCTGGCTGATCCAT 51237 Query 29164 -CTTTTTATTTTATG-CACGACGCGGAGAAACGGCGCGTGTTTGTGGACTCGGTCGAGGA 29221 |||||| || ||| || ||| |||| || ||| || || | ||||| | || Sbjct 51236 TCTTTTTCTTAAATGACAAGACCAAGAGAGAC----CGT-TTCGTCGCATCGGTGAAAGA 51182 Query 29222 ATTTTTGCAGGTGTGGAAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGGCGG 29281 || |||| |||||||| || || || || || || || ||||| || || || || Sbjct 51181 CTTCCTGCAAACTTGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGAGG 51122 Query 29282 TAAAGGCGCTAACCC-GACACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACATTT 29340 ||||| || ||||| ||| ||||| | ||| |||| | || || | || || Sbjct 51121 CAAAGGTGCCAACCCTGAC-CTTGGAGGCCCTGAG---GACG--GCCATGTCT-ACGTTG 51069 Query 29341 TAC---TGAAGGAATTGCGCGCAATGCTGGATAAACT-GCAATTGCAAACGGGTAAAACG 29396 || |||||||| | || | ||||| || | || | || |||| ||||| | Sbjct 51068 AACTCATGAAGGAAATACGTGACATGCTCAATGAGCTATCCGCTG-AAACTGGTAAGAAA 51010 Query 29397 TATGAATTGACAAGCGCAATCAGCTCTGGCCACGACAAAATTGCTGTAGTGAAATACGAC 29456 || || |||| ||| ||||| | || ||||| || || || | ||| | Sbjct 51009 TACGAGCTGACTTCCGCCATCAGTGCCGGTTGGGACAAGATCCAAGTGGTCGACTACAGC 50950 Query 29457 GTTGTGCAAAAATTTCTTGATAAAATATTTCTAATGAGTTACGATTTTAAAGGCGCATGG 29516 | || || || | | || | || || || ||||| ||||| |||||||| || ||| Sbjct 50949 GCTGCCCAGAAGTACATGGACCATATCTTCCTGATGAGCTACGACTTTAAAGGAGCCTGG 50890 Query 29517 TCAA---ACACCGATTTGGGATATCAAACTACACTCTACGCACCGAGTTGGAATCCCAAC 29573 || | | ||| | ||| | || || | || ||||| || |||| ||||| Sbjct 50889 TCTAATGATACC---CTCGGACACCAGACATCTCTGTACGCTCCTGCGTGGATGCCCAAG 50833 Query 29574 GAGCTTTACAACACTGACCACGCCGT-AAAGTC--GCTCACTAACCAAGGCGTGGACCCG 29630 ||| ||||| |||||| | || ||| || |||| || ||||| || |||| Sbjct 50832 GAGACTTACACCACTGATTTTGGAGTGAAATTCCTGCTCGCT---CAAGGTGTTAACCCC 50776 Query 29631 CGCAAAATTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACGGGCGTGACCGGTTAC 29690 || ||| | || || || || ||||||||||| || ||||| || || || || Sbjct 50775 AAGAAGATTGTCGTAGGTGTTGCTATGTACGGCCGAGGATGGACTGGAGTTCACGACTAT 50716 Query 29691 GTCGGTGACAACTATTTTAAAGGCACAGCTGCCGGGCCCGTGACCGGCACTTGGGATGAC 29750 | || | ||| || | || | ||| | || || || | ||||||||| | || Sbjct 50715 GAAGGCAAGAACCCCTTCACTGGGAACGCTACAGGACCTGTCAAAGGCACTTGGCAGGAT 50656 Query 29751 GGAGTTGTCGACTA 29764 ||||| || ||||| Sbjct 50655 GGAGTCGTTGACTA 50642 >seq262 Length=168198 Score = 152 bits (168), Expect = 4e-32 Identities = 154/200 (77%), Gaps = 13/200 (7%) Strand=Plus/Minus Query 33584 CGGCCACTTTGGGCAGCAGCGCCTGGTCCAAAACGCAcagcgcggtgagcgcg------- 33636 ||| |||||||||||||||||| | | ||||| |||||||||||| Sbjct 138918 CGGGCACTTTGGGCAGCAGCGCGGCTTGCTCGTGGCACATGGCGGTGAGCGCGTGCAGCG 138859 Query 33637 --gcccgctgcgcgcgcagatcgccgcgcgtaaactgcagcagcagcgcgcggtacttgc 33694 || ||||| |||||| ||||||||||| || |||||||||||||||||| || Sbjct 138858 CGGCGCGCTGGGCGCGCGTGTCGCCGCGCGTGAAGCGCAGCAGCAGCGCGCGGTGTTTCT 138799 Query 33695 gcACGTCCCCGGCGAACGCCGCCGGCCTC--ACCAGCACCTCGAACAGCACCAGCGGCGC 33752 ||||||| || ||||| ||| ||| | | |||||||||||||||||| |||||||| Sbjct 138798 GCACGTCGGCGCGGAACGACGC--GCCGCGGATCAGCACCTCGAACAGCACGAGCGGCGC 138741 Query 33753 CTTCGACTTCACCTCCAGTC 33772 |||||||||||||||||||| Sbjct 138740 CTTCGACTTCACCTCCAGTC 138721 Score = 138 bits (152), Expect = 9e-28 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 |||||||| || |||||||| ||||| ||||| || ||||| ||| |||||| || Sbjct 135087 GGCGGGTTCTTGAGTATGAACGTGTTCAGCTTGTGGTTGAAGTCGAGCACGCCGTGGTAG 135028 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 ||||| || ||||||||||| |||| |||| || | ||||||||| ||||| ||| Sbjct 135027 CCGCACGCCTTGCAGCCCTGCGAGATGGTGTTGCGCTTCGTGGACACGATCAGCTCCGTC 134968 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367 || ||||| || || ||||| |||| ||| |||||||||||||| Sbjct 134967 TCGGGGTTATCGCACTCCGGGCACAGCACGAACTTGCGGATGAA 134924 Score = 127 bits (140), Expect = 2e-24 Identities = 99/118 (84%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 || || ||||||||||| | ||| |||||||||| ||||||||||||||| || ||| Sbjct 133720 CCGTCCAGCAGGTCCTGCAGCTTGGAGGAGTCGTGGCTGCCGTTGACGATGAACCGCTCG 133661 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486 || ||| | |||| |||||| || |||||||||||||| ||||||||||| ||||||| Sbjct 133660 TTCTTGAAGTCGAACTGCGTCTGAGCGCCCAGCTCGCAGCCGAAGTACTTGGTCGGGT 133603 Score = 114 bits (126), Expect = 1e-20 Identities = 87/103 (84%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 34487 AAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGA 34546 || |||| || | || ||||||||||| | ||| |||||||||||||| |||||||||| Sbjct 133027 AAGTGGCTGGTCTGCCCAGCGCCTTGGCCACTTCCGGCATGTTGACGATCACAGTCTTGA 132968 Query 34547 TGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCAT 34589 |||||||||| || ||||| ||||| |||||||| | |||||| Sbjct 132967 TGCCGTTGCCTTTGCCTTCCACCTTCGCGCAGATCCTCGGCAT 132925 Score = 95.1 bits (104), Expect = 1e-14 Identities = 116/156 (74%), Gaps = 8/156 (5%) Strand=Plus/Minus Query 33427 TCCTCGGCCTGCTGCAGCCAGTCCAGGAAGGGCTGCGCGCGGCGCCGCACGT---CCGCC 33483 ||||| |||||||||||||| || ||||||||||||||||| |||| ||||| ||||| Sbjct 140476 TCCTCCGCCTGCTGCAGCCACTCGAGGAAGGGCTGCGCGCGCCGCCTCACGTCCGCCGCC 140417 Query 33484 ATCTCC-TCGCGGCTTAGCGCTTTGCGGGACGGCTTGTAAAACCACTCCACGATCGCTTT 33542 | |||| | | || || ||| ||| ||||| |||||||| ||| || || Sbjct 140416 AGCTCCTTGGACGCGTACTTCTT----GGAGGGCTTCGCTGCCCACTCCATGATGGCCTT 140361 Query 33543 CTTTTCCACCACGTTCAAGTCGTACAGCAGCTTGAA 33578 || ||||| | || | |||||| ||||||| ||| Sbjct 140360 CTCCTCCACTATGTCCTCGTCGTATAGCAGCTGGAA 140325 Score = 86.0 bits (94), Expect = 5e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 33427 TCCTCGGCCTGCTGCAGCCAGTCCAGGAAGGGCTGCGCGCGGCGCCGCACGTCCGCC 33483 ||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct 141060 TCCTCCGCCTGCTGCAGCCACTCGAGGAAGGGCTGCGCGCGCCGCCGCACGTCCGCC 141004 >seq4530 Length=43051 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || || || || ||||| ||||||||||| | || ||| || | Sbjct 13917 ATGCAGATCTTCGTTAAGACCTTGACCGGTAAAACCATTACTCTTGAGGTTGAGGCTTCC 13858 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | ||||| || || |||||||| ||| | ||| || || Sbjct 13857 GATACTATTGAGAACGTAAAGGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 13798 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||||||| | ||| || |||||||| || |||| | | ||| || | || |||||| Sbjct 13797 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 13738 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| || || | ||| ||||| || | ||||| || || Sbjct 13737 ATTCAGAAAGAGTCCACCCTTCACTTGGTGCTACGTCTGCGCGGTGG 13691 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || || || || ||||| ||||||||||| | || ||| || | Sbjct 13461 ATGCAGATCTTCGTTAAGACCTTGACCGGTAAAACCATTACTCTTGAGGTTGAGGCTTCC 13402 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | ||||| || || |||||||| ||| | ||| ||| || Sbjct 13401 GATACTATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAGGGCATTCCCCCGGACCAG 13342 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||||||| | ||| || |||||||| || |||| | | ||| || | || |||||| Sbjct 13341 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 13282 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| || || | ||| | || || | ||||| || || Sbjct 13281 ATTCAGAAAGAGTCCACCCTTCACTTAGTATTGCGTCTGCGCGGTGG 13235 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || || ||||| || || ||||||||||| | || || || | Sbjct 13005 ATGCAGATCTTCGTAAAGACTTTGACTGGTAAAACCATTACTCTTGAGGTTGAAGCTTCC 12946 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | ||||| || || |||||||||||| | ||| ||| || Sbjct 12945 GATACCATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCGGACCAG 12886 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||||||| | ||| || |||||||| || |||| | | ||| || | || |||||| Sbjct 12885 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 12826 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || || || ||||| | ||| |||| | | ||||| || || Sbjct 12825 ATCCAGAAGGAGTCTACTCTACACTTGGTACTGCGTCTGCGTGGTGG 12779 >seq3754 Length=50117 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || | || || |||||||| || ||||| || || Sbjct 772 ATGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 831 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || || ||| ||||| |||||| | ||| || || Sbjct 832 GACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAGGAAGGCATCCCCCCCGACCAG 891 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||||| || | || || ||||| || || |||| | | || | | ||||||||| Sbjct 892 CAGAGACTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTCTCCGATTACAAC 951 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || |||||||||||||| | ||| |||| || | || || || |||| Sbjct 952 ATCCAAAAAGAATCTACCCTCCACTTGGTATTGCGTCTCCGTGGTGGAA 1000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412711782087893