Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq11207 192 9e-43
seq955 190 3e-42
seq137 111 2e-18
>seq11207
Length=11417
Score = 192 bits (212), Expect = 9e-43
Identities = 187/241 (78%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
||||||||||||| |||||||| ||||| |||||||||| |||| || |||||| |||
Sbjct 5105 TGTACTTGGTGACAGCCTTGGTCCCCTCGCTGACGGCGTGCTTGGCGAGCTCGCCGGGCA 5164
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || | ||||| |||||| | ||| | || | |||||| ||||||||| |
Sbjct 5165 GCAGGAGCCTCACGGAGGTCTGCACCTCCCTGGAGGTGATCGTAGAGCGCTTGTTGTAGT 5224
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||||||||| ||||||| | ||||||| |||| |||||||| || ||||| ||||
Sbjct 5225 GCGCCAGGCGGGACGCCTCGGCGGCGATGCGTTCGAAGATGTCGTTCACGAACGAATTCA 5284
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| | || ||||||| || ||| ||||| ||||||||||| |||||||
Sbjct 5285 TGATGGACATGGCCTTACTGGAGATTCCGGTGTCAGGGTGGACCTGCTTGAGAACCTTGT 5344
Query 1485710 A 1485710
|
Sbjct 5345 A 5345
>seq955
Length=106330
Score = 190 bits (210), Expect = 3e-42
Identities = 200/263 (76%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|||||||| || | || |||| |||| |||||||||||||||| || |||||||||||
Sbjct 58950 TGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAG 58891
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
|||||||||| || || | ||||| ||| |||||| | ||| || || ||||
Sbjct 58890 ACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGCAGTGTACGTGAACGCCG 58831
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| ||||| || | ||||||||||||||||| | ||| ||||| |||||||||||||||
Sbjct 58830 ATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCG 58771
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
|| |||| |||||||| | | || ||||| || ||| || ||||| | |||| |
Sbjct 58770 ATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTGGGGGCGGGGCGTGGCC 58711
Query 2073781 GCATTGAAGAGCGTGGGCGTCGC 2073803
|| ||| |||||||| ||||
Sbjct 58710 GCCGAGAACAGCGTGGGGCTCGC 58688
>seq137
Length=194913
Score = 111 bits (122), Expect = 2e-18
Identities = 157/220 (71%), Gaps = 7/220 (3%)
Strand=Plus/Plus
Query 794342 CTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCT 794401
||||||| ||| ||||| || ||||| || || |||||||| || ||||| ||||
Sbjct 23373 CTTCGTCACGAGAGATCATCTCATTGCTGAATGTCAGACCGGGCATCAGACCGCGTTTCT 23432
Query 794402 TGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGC 794461
| | ||| || || | ||| ||||||||||| || ||||||||||||| || ||
Sbjct 23433 TCATCCAGAATATAGACGCGAAGCTGCCCGAGAAGAATATGCCCTCGACGGATGCGAATG 23492
Query 794462 CGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCCCA 794519
| |||| |||||| | || || |||| |||| || |||||||| | ||||||
Sbjct 23493 CCACGATGCGCTCGCCGAAGGT-----GGCCGTCTTGCTGCCGATCCACTGGAGCGCCCA 23547
Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG 794559
|| ||||| ||| | || | |||| ||| || | ||||
Sbjct 23548 GTCCGCCTTCTTCTTGACGCACGGCAGCGTCTCCACGGCG 23587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7913501829951639
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |