Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq754 259 4e-64 seq4530 107 2e-18 seq7468 82.4 6e-11 >seq754 Length=177731 Score = 259 bits (286), Expect = 4e-64 Identities = 664/992 (67%), Gaps = 33/992 (3%) Strand=Plus/Minus Query 29073 GCGTATTTTGTAGAATGGGGCGTATATGGCCGCAACTTTCCGGTAGACAAAGTGCCGCTG 29132 || || || || ||||||||||| || | | || ||||| || ||| | || | Sbjct 51594 GCTTACTTCGTCGAATGGGGCGTGTACCCCAGAAAGTTTCCAGTGGACCGTATCCCAGTA 51535 Query 29133 CCCAACCTCTCGCATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGGGCTCAAC 29192 || || ||| ||||||| ||||||||||||| || |||||||| || || || | ||| Sbjct 51534 CCAAATCTCACGCATCTCCTGTACGGTTTCATCCCAATTTGCGGAGGTGATGGCATTAAC 51475 Query 29193 GACGCCCTCAAAACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAAGGGCCGT 29252 ||| | || || |||||||| | || |||||||| || |||| ||||| Sbjct 51474 GACAGTTTGAAGGAGATCGAAGGCAGTTTCCAAGCTCTGCAACGTTCCTGCAGCGGCCGA 51415 Query 29253 TCAGATTTCAAAGTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCAAAAGGGC 29312 || |||||||| | || || ||||| ||||| || | || ||||| || || || Sbjct 51414 GAGGACTTCAAAGTGACAATCCATGATCCATGGGCAGCCTTGCAGAAACCCCAGAAAGGT 51355 Query 29313 GTGTCTGCGTGGAACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGCGGCCAAGCTG 29372 ||||| | |||||||| || |||||||| || ||||| ||||| ||| | || | Sbjct 51354 CTGTCTTCTTGGAACGAACCTTACAAAGGCAATTTCGGCCAGCTCATGATGTTGAAACAA 51295 Query 29373 GCCAATCCGCACCTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGACCCGTTC 29432 || || || |||| ||||| || || |||||||| |||||||| || | || || ||| Sbjct 51294 GCGAAACCTGACCTGAAAATCCTCCCATCCATCGGTGGCTGGACCCTGGCTGATCCATTC 51235 Query 29433 TATTTC----ATG-CACGACGCGGAAAAACGGCGTGTGTTTGTGGACTCGGTCAGAGAAT 29487 | |||| ||| || ||| || | || ||| || || | ||||| | ||| | Sbjct 51234 TTTTTCTTAAATGACAAGACCAAGAGAGAC--CGT---TTCGTCGCATCGGTGAAAGACT 51180 Query 29488 TTCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGTGGCA 29547 | ||||| ||||| || || || || || || || || |||||||| || || |||| Sbjct 51179 TCCTGCAAACTTGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGAGGCA 51120 Query 29548 AAGGCGCCAACCC-GACACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACATTTTA 29606 |||| |||||||| ||| ||||| | ||| |||| | || || | || || | Sbjct 51119 AAGGTGCCAACCCTGAC-CTTGGAGGCCCTGAG---GACG--GCCATGTCT-ACGTTGAA 51067 Query 29607 C---TAAAGGAATTGCGCGCAATGATGGACGAGTTA-CAATTGCAAACGGGCAAAACGTA 29662 | | |||||| | || | ||| | | ||| || | || |||| || || | || Sbjct 51066 CTCATGAAGGAAATACGTGACATGCTCAATGAGCTATCCGCTG-AAACTGGTAAGAAATA 51008 Query 29663 CGAGTTGACAAGCGCAATCAGTTCCGGACATGACAAGATTGCTGTAGTTAAATACGACGC 29722 |||| |||| ||| |||||| |||| |||||||| || || | ||| ||| Sbjct 51007 CGAGCTGACTTCCGCCATCAGTGCCGGTTGGGACAAGATCCAAGTGGTCGACTACAGCGC 50948 Query 29723 TGCGCAAAAGTTTCTCGATAAAATATTCCTCATGAGCTACGATTTTAAAGGCGCGTGGTC 29782 ||| || |||| | || | || ||||| ||||||||||| |||||||| || ||||| Sbjct 50947 TGCCCAGAAGTACATGGACCATATCTTCCTGATGAGCTACGACTTTAAAGGAGCCTGGTC 50888 Query 29783 AA---ACACCGATTTGGGCTACCAAACTACTCTCTACGCGCCGAGTTGGAACCCAAACGA 29839 | | ||| | || |||| || |||| ||||| || |||| || || || Sbjct 50887 TAATGATACC---CTCGGACACCAGACATCTCTGTACGCTCCTGCGTGGATGCCCAAGGA 50831 Query 29840 -ACTGTACAACACGGACCACGCCGTTAAGTTGCT-CACGAACCAGGGCGTGGACCCGCGC 29897 ||| |||| ||| || | || || || || | || || || || |||| Sbjct 50830 GACT-TACACCACTGATTTTGGAGTGAAATTCCTGCTCG-CTCAAGGTGTTAACCCCAAG 50773 Query 29898 AAAATTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACAGGCGTGTCGGGTTATGAC 29957 || ||| | || || || || ||||||||||| || ||||| || || | ||||| Sbjct 50772 AAGATTGTCGTAGGTGTTGCTATGTACGGCCGAGGATGGACTGGAGTTCACGACTATGAA 50713 Query 29958 GGTGACAACTATTTTACGGGCACAGCTGCTGGGCCCGTGACCGGCACTTGGGAAGACGGC 30017 || | ||| || || || | ||| | || || || | ||||||||| | || || Sbjct 50712 GGCAAGAACCCCTTCACTGGGAACGCTACAGGACCTGTCAAAGGCACTTGGCAGGATGGA 50653 Query 30018 GTTGTCGACTATCGCCAAATTGAAAACGAAAT 30049 || || ||||| | | || | |||||||| Sbjct 50652 GTCGTTGACTACAGAGAGATAGCGAACGAAAT 50621 >seq4530 Length=43051 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || ||||| || || ||||||||||| | || || ||| | Sbjct 13005 ATGCAGATCTTCGTAAAGACTTTGACTGGTAAAACCATTACTCTTGAGGTTGAAGCTTCC 12946 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | ||||| || || || ||||||||| | ||| ||| ||| Sbjct 12945 GATACCATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCGGACCAG 12886 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||| | ||| || |||||||| || || | | ||| || | ||||||||| Sbjct 12885 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 12826 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || ||||||||||| | ||| |||| || | |||| || || Sbjct 12825 ATCCAGAAGGAGTCTACTCTACACTTGGTACTGCGTCTGCGTGGTGG 12779 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || || || || ||||||||||| | || |||||| | Sbjct 13461 ATGCAGATCTTCGTTAAGACCTTGACCGGTAAAACCATTACTCTTGAGGTTGAGGCTTCC 13402 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | ||||| || || || ||||| ||| | ||| ||| ||| Sbjct 13401 GATACTATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAGGGCATTCCCCCGGACCAG 13342 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||| | ||| || |||||||| || || | | ||| || | ||||||||| Sbjct 13341 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 13282 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| || ||||| || | ||| | || ||| | |||| || || Sbjct 13281 ATTCAGAAAGAGTCCACCCTTCACTTAGTATTGCGTCTGCGCGGTGG 13235 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || || || || ||||||||||| | || |||||| | Sbjct 13917 ATGCAGATCTTCGTTAAGACCTTGACCGGTAAAACCATTACTCTTGAGGTTGAGGCTTCC 13858 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | ||||| || || || ||||| ||| | ||| || ||| Sbjct 13857 GATACTATTGAGAACGTAAAGGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 13798 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||| | ||| || |||||||| || || | | ||| || | ||||||||| Sbjct 13797 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 13738 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||| || ||||| || | ||| ||||| Sbjct 13737 ATTCAGAAAGAGTCCACCCTTCACTTGGTG 13708 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| || || || || || || || || || ||||| || | || ||| || Sbjct 14148 AATATGCAGATCTTCGTGAAGACGTTGACTGGTAAGACCATCACTTTGGAGGTCGAGCCT 14089 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 | ||||| ||| | |||||| ||||| || ||||| ||| | ||| || Sbjct 14088 GCTGATACCATCGAGAATGTAAAAGCTAAGATCCAGGACAAAGAGGGCATTCCCCCAGAC 14029 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||||||||| | ||| || |||||||| || || | | ||| || | |||||| Sbjct 14028 CAGCAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTAC 13969 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| || ||||| ||||| | ||| |||| || | |||| || || Sbjct 13968 AACATCCAGAAGGAATCTACTCTACACTTGGTACTGCGTCTGCGTGGTGG 13919 Score = 93.3 bits (102), Expect = 3e-14 Identities = 164/238 (69%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| ||||| | || ||||| ||||| || |||| |||||| | Sbjct 11864 ATGCAGATCTTTGTAAAAACACTGACTGGCAAGACCATCACACTCGAGGTTGAGGCTTCC 11805 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||| || || || |||||| | ||| || ||| Sbjct 11804 GACACAATCGAGAATGTTAAGGCAAAAATCCAAGACAAGGAAGGCATCCCCCCCGACCAG 11745 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || || || || || | | ||| || | ||||||||| Sbjct 11744 CAGCGTCTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGCACACTGTCAGACTACAAC 11685 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA-ATAATAAA 107792 |||||||||||||| || | || | ||| | |||||| |||| |||| | |||||| Sbjct 11684 ATTCAAAAGGAGTCAACTCTACATCTTGTGCTTAGATTGAGAGGTGGAATACAATAAA 11627 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| || |||||| |||| |||||||| || || | ||| ||||| Sbjct 12320 ATGCAAATTTTCGTTAAAACTCTAACTGGCAAAACTATAACTTTGGAAGTTGAGGCCTCT 12261 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | |||||| || || ||||||||||| | || || ||| Sbjct 12260 GACACTATTGAGAACGTAAAAGCCAAAATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 12201 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731 ||||||||||||| || || || ||||| || |||||| || | | ||||| Sbjct 12200 CAGAGACTTATTTTCGCTGGCAAGCAGCTAGAAGATGGACGC----ACTCTATCTGACTA 12145 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||| || || || || | ||| ||||| || | |||| || || Sbjct 12144 CAACATTCAGAAAGAATCAACCCTTCACTTGGTGCTGCGTCTGCGCGGTGG 12094 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/231 (68%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| ||||| | || ||||| ||||| || | || ||||| | Sbjct 12092 ATGCAGATCTTTGTAAAAACACTGACTGGCAAGACCATCACTCTTGAGGTAGAGGCCTCC 12033 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | |||||| || || |||||||| || | || || ||| Sbjct 12032 GATACAATTGAGAATGTAAAAGCCAAAATCCAAGATAAAGAGGGTATTCCTCCAGACCAG 11973 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731 ||||||||||| | ||| || || ||||| || |||||| || | ||||||| Sbjct 11972 CAGAGACTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGC----ACCTTATCGGACTA 11917 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||| || ||||| || | ||| ||||| || | |||| || || Sbjct 11916 CAACATTCAGAAAGAGTCAACCCTTCACTTGGTGCTGCGTCTGCGCGGTGG 11866 >seq7468 Length=24208 Score = 82.4 bits (90), Expect = 6e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 104291 AACGTGTGTTTTGTGCCGTGCGGGCATGTGGTGGCGTGCGTCAAGTGCGCGTTTGCTTTG 104350 |||||||| || |||||||||||||| ||||||||||||| |||||||||| | | Sbjct 19053 AACGTGTGCTTCGTGCCGTGCGGGCACGTGGTGGCGTGCGCCAAGTGCGCGCTCTCCACC 18994 Query 104351 GCCGAGTGCCCCATGTGCCG 104370 | |||||||||||||||| Sbjct 18993 AACAAGTGCCCCATGTGCCG 18974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398751373314889