Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq4530 107 3e-18 seq3664 93.3 7e-14 seq3754 89.7 8e-13 >seq4530 Length=43051 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| |||||||| | || || || ||||| || |||| || ||| | | Sbjct 13688 TGCAGATCTTCGTAAAAACACTGACTGGCAAGACAATCACACTTGAGGTTGAAGCTTCAG 13629 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | |||||||| ||||| || || ||||||||||| || || || | Sbjct 13628 ATACCATTGAGAATGTAAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCGGACCAGC 13569 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || ||||| || ||||| |||| ||| | || | |||| || || | Sbjct 13568 AGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAACA 13509 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || ||||| ||||| | ||||||||||| || Sbjct 13508 TTCAGAAAGAGTCGACCCTTCATTTAGTATTGCG 13475 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| |||| || || || || ||||| |||||| |||| || ||| | || Sbjct 13004 TGCAGATCTTCGTAAAGACTTTGACTGGTAAAACCATTACTCTTGAGGTTGAAGCTTCCG 12945 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | |||||||| ||||| || |||||||||||||| || || || | Sbjct 12944 ATACCATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCGGACCAGC 12885 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| || ||||| || ||||| |||| ||| | || | |||| || || | Sbjct 12884 AGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAACA 12825 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | || || || || ||| | || || ||| Sbjct 12824 TCCAGAAGGAGTCTACTCTACACTTGGTA 12796 >seq3664 Length=101255 Score = 93.3 bits (102), Expect = 7e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | ||||| ||||| || || | || |||||| | | Sbjct 95235 TGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCAG 95294 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || |||||| ||| ||| |||||||| || || || || | Sbjct 95295 ACACCATTGAGAATGTCAAGGCTAAAATTCAAGATAAGGAAGGCATCCCCCCAGACCAGC 95354 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| ||||| || || ||| | || ||| | || | | || || || | Sbjct 95355 AGAGACTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACTCTCTCCGACTACAACA 95414 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || ||||| | ||||| || Sbjct 95415 TCCAAAAAGAATCTACCCTCCATCTGGTATTGCG 95448 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | ||||| ||||| || || | || |||||| | | Sbjct 94095 TGCAGATCTTTGTGAAGACCCTCACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCAG 94154 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || || |||||| ||| || |||||||| || ||||| || | Sbjct 94155 ACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAGGAAGGCATCCCCCCCGACCAGC 94214 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| || || || |||||| | || ||| | || | | ||||| || | Sbjct 94215 AGAGACTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTCTCCGATTACAACA 94274 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || |||| || ||||| || Sbjct 94275 TCCAAAAAGAATCTACCCTCCACTTGGTATTGCG 94308 >seq3754 Length=50117 Score = 89.7 bits (98), Expect = 8e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | ||||| ||||| || || | || |||||| | | Sbjct 773 TGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCAG 832 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || || |||||| ||| || |||||||| || ||||| || | Sbjct 833 ACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAGGAAGGCATCCCCCCCGACCAGC 892 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| || || || |||||| | || ||| | || | | ||||| || | Sbjct 893 AGAGACTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTCTCCGATTACAACA 952 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || |||| || ||||| || Sbjct 953 TCCAAAAAGAATCTACCCTCCACTTGGTATTGCG 986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785912851508920