Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq10180 96.9 1e-16
seq1088 96.9 1e-16
seq200 96.9 1e-16
seq1710 95.1 4e-16
seq1171 95.1 4e-16
seq110 95.1 4e-16
seq900 93.3 1e-15
seq2707 91.5 5e-15
seq12997 89.7 2e-14
seq12383 89.7 2e-14
>seq10180
Length=14062
Score = 96.9 bits (106), Expect = 1e-16
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 4309 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 4368
Query 2828 CCCGGGCTTCAGC 2840
||| || ||| ||
Sbjct 4369 CCCTGGTTTCGGC 4381
>seq1088
Length=101593
Score = 96.9 bits (106), Expect = 1e-16
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 505 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 446
Query 2828 CCCGGGCTTCAGC 2840
||| || ||| ||
Sbjct 445 CCCTGGTTTCGGC 433
>seq200
Length=182018
Score = 96.9 bits (106), Expect = 1e-16
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 85237 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 85178
Query 2828 CCCGGGCTTCAGC 2840
||| || ||| ||
Sbjct 85177 CCCTGGTTTCGGC 85165
>seq1710
Length=88978
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 10026 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 9967
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 9966 CCTGGTTTCGGC 9955
>seq1171
Length=98640
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 62012 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 62071
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 62072 CCTGGTTTCGGC 62083
>seq110
Length=208459
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 82388 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 82447
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 82448 CCTGGTTTCGGC 82459
>seq900
Length=107886
Score = 93.3 bits (102), Expect = 1e-15
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824
||| || ||| |||||||||||||||||| | ||||||||||||| ||||||||||||||
Sbjct 93826 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTC 93885
Query 2825 AACCCCGGGCTTCAGC 2840
|| ||| || ||| ||
Sbjct 93886 AATCCCTGGTTTCGGC 93901
>seq2707
Length=62297
Score = 91.5 bits (100), Expect = 5e-15
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| | ||||||||||||| ||||||||||||||||
Sbjct 42889 GGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAAT 42830
Query 2828 CCCGGGCTTCAGC 2840
||| || ||| ||
Sbjct 42829 CCCTGGTTTCGGC 42817
>seq12997
Length=7726
Score = 89.7 bits (98), Expect = 2e-14
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| |
Sbjct 1424 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATC 1483
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 1484 CCTGGTTTCGGC 1495
>seq12383
Length=19920
Score = 89.7 bits (98), Expect = 2e-14
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| |
Sbjct 3001 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATC 3060
Query 2829 CCGGGCTTCAGC 2840
|| || ||| ||
Sbjct 3061 CCTGGTTTCGGC 3072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15845127267645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |