Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq754 302 4e-77 seq3754 107 2e-18 seq3481 107 2e-18 seq4530 105 6e-18 seq3664 104 2e-17 >seq754 Length=177731 Score = 302 bits (334), Expect = 4e-77 Identities = 786/1188 (66%), Gaps = 38/1188 (3%) Strand=Plus/Minus Query 59923 AAAGTCGTTGCCGCATATTTTGTCGAATGGGGTGTTTATCCTAGAAATTTTCCTGTAGAT 59982 ||||| || | || || || ||||||||||| || || || ||||| ||||| || || Sbjct 51606 AAAGTTGTGGGAGCTTACTTCGTCGAATGGGGCGTGTACCCCAGAAAGTTTCCAGTGGAC 51547 Query 59983 CGAGTGCCCACT-CCTAATCTATCGCATATTCTATACGGATTTATTCCGATATGCGGCGG 60041 || | |||| | || ||||| ||||| | || ||||| || || || || ||||| || Sbjct 51546 CGTAT-CCCAGTACCAAATCTCACGCATCTCCTGTACGGTTTCATCCCAATTTGCGGAGG 51488 Query 60042 CGACGGTATCAACGACAGTCTTAAAACCATAACCGGTAGTTTCGAAGCGCTTCAGCGATC 60101 || || || ||||||||| | || || || |||||| |||| || || || || Sbjct 51487 TGATGGCATTAACGACAGTTTGAAGGAGATCGAAGGCAGTTTCCAAGCTCTGCAACGTTC 51428 Query 60102 GTGTTCAGGTCGAGACGACTTTAAAGTATCAATTCACGATCCATGGGCCGCCGTCCAGAA 60161 || || ||||| ||||| ||||| |||| || ||||||||||| ||| | ||||| Sbjct 51427 CTGCAGCGGCCGAGAGGACTTCAAAGTGACAATCCATGATCCATGGGCAGCCTTGCAGAA 51368 Query 60162 ACCCCAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTCGGACAATTAAT 60221 |||||| ||| | | ||||||||||||| |||||||| |||||||| || | || Sbjct 51367 ACCCCAGAAAGGTCTGTCTTCTTGGAACGAACCTTACAAAGGCAATTTCGGCCAGCTCAT 51308 Query 60222 GGCAGCCAAACTGGCAAATCCCCACATCAAAGTGTTGCCCTCGATCGGAGGTTGGACTCT 60281 | |||| || || || || | ||| | | || || ||||| || ||||| || Sbjct 51307 GATGTTGAAACAAGCGAAACCTGACCTGAAAATCCTCCCATCCATCGGTGGCTGGACCCT 51248 Query 60282 ATCCGATCCGTTCTTTTACTTTCACGATACGGATAAACGAAAGATTTTTGTAGATTCTGT 60341 | ||||| ||||||| ||| | || | | || || | ||| || | || || Sbjct 51247 GGCTGATCCATTCTTTTTCTTAAATGACAAGACCAAGAGAGACCGTTTCGTCGCATCGGT 51188 Query 60342 CGTGGAGTTTCTACAGACGTGGAAATTTTTCGACGGTGTCGACATCGACTGGGAGTTTCC 60401 || || || || || |||||||| ||||| ||||| || ||||| |||||||| || Sbjct 51187 GAAAGACTTCCTGCAAACTTGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCC 51128 Query 60402 CGGCGGAAAAGGTGCCAATCCCAACGTAGGCGACGCCGA--AC-GCGATCGCGAAACGTA 60458 || || ||||||||||| || || | || | | | || || || || | |||| Sbjct 51127 TGGAGGCAAAGGTGCCAACCCTGACCTTGGAGGCCCTGAGGACGGCCATGTC--TACGTT 51070 Query 60459 CACCATTCTGTTGAAAGATTTACGCGAGGCGCTAGATCGATTAACCCTCGAAACGAATCG 60518 | || |||| || |||| || ||| || || || ||||| | Sbjct 51069 GA----ACTCATGAAGGAAATACGTGACATGCTCAATGAGCTATCCGCTGAAACTGGTAA 51014 Query 60519 AACGTACGAGTTGACCAGCGCAATTAGCGCCGGCGATGACAAAATCGCCGTCGTCGACTA 60578 | |||||| |||| ||| || || ||||| ||||| ||| || |||||||| Sbjct 51013 GAAATACGAGCTGACTTCCGCCATCAGTGCCGGTTGGGACAAGATCCAAGTGGTCGACTA 50954 Query 60579 CACCGCTGCTCAAGAATATTTAGATTTAAtttttttGATGACGTACGATTTTAAAGGAGC 60638 || |||||| || | || | || || || |||||| ||||| ||||||||||| Sbjct 50953 CAGCGCTGCCCAGAAGTACATGGACCATATCTTCCTGATGAGCTACGACTTTAAAGGAGC 50894 Query 60639 CTGGTCGAATAACGATCTGGGCTATCAGACTACTCTATACGCTCCTTCGTTTAATCCTAA 60698 |||||| ||| | || || | ||||| |||| ||||||||| ||| | || || Sbjct 50893 CTGGTCTAATGATACCCTCGGACACCAGACATCTCTGTACGCTCCTGCGTGGATGCCCAA 50834 Query 60699 AGAACATTATACTACCGATTTTGCCG-----TTCGTGCTCTACTCAAGCAAAAAGTCGAG 60753 || ||| || || ||||||| | ||| ||||| |||||| || | Sbjct 50833 GGAGACTTACACCACTGATTTTGGAGTGAAATTCCTGCTC-GCTCAAG----GTGTTAAC 50779 Query 60754 AATaaaaaaaTTATTGTCGGCGTGGCCATGTACGGTCGCGGCTGGACCGGCGTAAGCGAT 60813 || || ||| | || || || || |||||||| || || ||||| || || ||| Sbjct 50778 CCCAAGAAGATTGTCGTAGGTGTTGCTATGTACGGCCGAGGATGGACTGGAGTTCACGAC 50719 Query 60814 TTTGTTGACGATAATAATCCATTTTCCGGAACGGCCAAGGGACCGGTCAAAGGAACATGG 60873 | ||| | || || || || | || | || | ||||| |||||||| || ||| Sbjct 50718 T---ATGAAGGCAAGAACCCCTTCACTGGGAACGCTACAGGACCTGTCAAAGGCACTTGG 50662 Query 60874 GAAGACGGAGTCGTCGACTATAGAGAGATTTTCAATAATTTCG-TC---GCCAATAACCC 60929 | || |||||||| ||||| |||||||| || | ||| || || ||| Sbjct 50661 CAGGATGGAGTCGTTGACTACAGAGAGATAGCGAACGAAATCGCTCAAGGCAAAT----- 50607 Query 60930 GATGGAATAT---TACGATTCCGTTGCAAAAGCGGCGTACGTCTTTAATAACTCGACCGG 60986 ||| ||| ||||| |||||| |||| | ||||| || | | | || || Sbjct 50606 --GGGAGTATCGATACGACAGTGTTGCAGAAGCTCCCTACGTGTTCAGAGAGGCTACGGG 50549 Query 60987 CGAGCTCATCACTTACGACAATCCTCGGTCGGTTCTGGATAAAGCAAAATATGTATTGGA 61046 || || ||||| |||||| | | ||||| | | || | |||||||| | Sbjct 50548 GGATCTTATCACGTACGACGACGCGAGGTCGACGATTGCCAAGGGGAAATATGTGAGAAA 50489 Query 61047 CTATAGCTTGGGTGGTTTGTTCGCTTGGGAGATCGACGCCGACAACGG 61094 ||| |||| ||| ||||||| ||||| || ||||| |||||||| Sbjct 50488 TAATAAGCTGGGGGGTCTGTTCGCCTGGGAAATAGACGCGGACAACGG 50441 >seq3754 Length=50117 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || || ||| | ||||| ||||||| ||||| Sbjct 772 ATGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 831 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || || |||||| || || || || || || ||||| ||| Sbjct 832 GACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAGGAAGGCATCCCCCCCGACCAG 891 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || |||||||| | || || |||||||| ||||||| | | || ||||||||| Sbjct 892 CAGAGACTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTCTCCGATTACAAC 951 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 || ||||||||||| ||| | || || || || Sbjct 952 ATCCAAAAAGAATCTACCCTCCACTTGGTATT 983 >seq3481 Length=53562 Score = 107 bits (118), Expect = 2e-18 Identities = 167/237 (70%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 25170 ACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAG 25229 |||| ||||| | || || ||||| ||||||| || | ||||| | || || || | Sbjct 24047 ACAAAATGCAGATTTTCGTCAAAACCCTAACCGGGAAGACCATCACCCTTGAGGTGGAGG 24106 Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 || || || || ||| | || || || ||| ||||| |||||||| ||||| | Sbjct 24107 CCTCGGACACCATTGAGAACGTGAAGGCCAAGATTCAGGATAAGGAGGGTATTCCGCCGG 24166 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGA 25347 | ||||| | ||||| | || ||||||||| || ||||||| | | |||| ||| Sbjct 24167 ACCAGCAGCGTCTCATCTTCGCCGGCAAACAGCTGGAAGATGGCCGCACCCTGTC--CGA 24224 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 ||||||||| || || ||||| || |||| || ||| | || | |||||||| || Sbjct 24225 TTACAATATCCAGAAGGAATCTACTCTTCACTTGGTGCTCAGGCTAAGAGGAGGTAA 24281 >seq4530 Length=43051 Score = 105 bits (116), Expect = 6e-18 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | |||||||||||| | || || || | ||||| |||| || || || | Sbjct 11864 ATGCAGATCTTTGTAAAAACACTGACTGGCAAGACCATCACACTCGAGGTTGAGGCTTCC 11805 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || || |||||| || || || || || || ||||| ||| Sbjct 11804 GACACAATCGAGAATGTTAAGGCAAAAATCCAAGACAAGGAAGGCATCCCCCCCGACCAG 11745 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTACA 25352 || | ||||| | || ||||| ||||| ||||||| | | ||||| || |||| Sbjct 11744 CAGCGTCTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGCACACTGTCA--GACTACA 11687 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 | |||||||| || || || | ||| | ||| | ||||||||||| |||| Sbjct 11686 ACATTCAAAAGGAGTCAACTCTACATCTTGTGCTTAGATTGAGAGGTGGAA 11636 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | |||||||||||| | || || || | ||||| | || || || ||| | Sbjct 12092 ATGCAGATCTTTGTAAAAACACTGACTGGCAAGACCATCACTCTTGAGGTAGAGGCCTCC 12033 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | |||||| ||||| |||||||||||||| || || || ||| Sbjct 12032 GATACAATTGAGAATGTAAAAGCCAAAATCCAAGATAAAGAGGGTATTCCTCCAGACCAG 11973 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||||| || | | ||||| || || ||||||| | | | || ||||| Sbjct 11972 CAGAGACTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCTTATCGGACTACAAC 11913 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTG 25384 ||||| ||||| || ||| |||| || ||| Sbjct 11912 ATTCAGAAAGAGTCAACCCTTCACTTGGTG 11883 >seq3664 Length=101255 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | || || ||| | ||||| ||||||| ||||| Sbjct 94094 ATGCAGATCTTTGTGAAGACCCTCACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 94153 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || || |||||| || || || || || || ||||| ||| Sbjct 94154 GACACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAGGAAGGCATCCCCCCCGACCAG 94213 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || |||||||| | || || |||||||| ||||||| | | || ||||||||| Sbjct 94214 CAGAGACTCATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTCTCCGATTACAAC 94273 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 || ||||||||||| ||| | || || || || Sbjct 94274 ATCCAAAAAGAATCTACCCTCCACTTGGTATT 94305 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || || ||| | ||||| ||||||| ||||| Sbjct 95234 ATGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 95293 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || ||| | || || |||||| ||||| || || || || || || ||| Sbjct 95294 GACACCATTGAGAATGTCAAGGCTAAAATTCAAGATAAGGAAGGCATCCCCCCAGACCAG 95353 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || |||||||| | | || || ||||| ||||||| | | | || ||| ||||| Sbjct 95354 CAGAGACTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACTCTCTCCGACTACAAC 95413 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 || ||||||||||| ||| | ||| | || || Sbjct 95414 ATCCAAAAAGAATCTACCCTCCATCTGGTATT 95445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444950851492320