Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq955 318 8e-82 seq4 105 9e-18 seq137 91.5 2e-13 >seq955 Length=106330 Score = 318 bits (352), Expect = 8e-82 Identities = 1131/1750 (65%), Gaps = 28/1750 (2%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || ||||| || | || || ||||| || ||||||| ||| | ||||| ||| || Sbjct 60318 GCCGGTTTCGTCCTCAGGTAATACATGCCAGTTTTCAAACCCATTTTCCATGCGTGAAAG 60259 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || ||||| ||| ||| | || || || | |||||| || | || || || Sbjct 60258 TGAATTGATGTTAATTTACCATAGTTGGGTTCAGCCACATGAATGTTGAATGACTGGCTC 60199 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTT-TTGA--GGAATT 68571 || || || ||||| |||| ||| || ||||| | ||| ||| | |||| | ||| Sbjct 60198 TGGTCTATAAAAGCCCCTCGATCAGCTGCCATCTG---AATGCTCGTCTTGACTGAAATC 60142 Query 68572 TCCCAAATAGTCTT--AAAAATCTGTTTGATATCATCTGGAAG-GCTCG--TATTTTGAA 68626 ||||| | ||||| | || ||| || || || | |||| ||| ||||||| | Sbjct 60141 TCCCAGACTGTCTTGTACAATTCTCTT--ATTTCTTTGGGAATAGCTTCAATATTTTGGA 60084 Query 68627 TGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCG 68686 |||||| | | || |||| || || || || |||| |||||| | ||| | Sbjct 60083 CAGATCCATTGTTGTGAATGATTAGGTTTTTCATATCTTCATCCCACAAGTCCGCCTCGG 60024 Query 68687 TTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAG 68746 | | | ||| || ||||| | || || | || || || || || | || || || Sbjct 60023 TCAGATCTCGCAGCAGATGATGGTTCACGACCTGGAACTCGCCCGACAGGACCCTGCGCT 59964 Query 68747 TGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTG 68806 ||| || ||| ||| | || || | || || ||||| || || ||||| || || | Sbjct 59963 GGTAGATGTTAGACGTAAAAGGCTCGAAGGACTCGTTATTGCCGAGGATTTGTGCGGTGG 59904 Query 68807 ATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTAT 68866 | || || ||||| ||||| | || | |||| ||||||||| | |||||| | Sbjct 59903 AGGCGGTGGGCATCGGTGCTAATAAGAGCGAGTTTCGGAGACCATGTTTAGCGATTTTTT 59844 Query 68867 CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTA 68926 |||| ||| ||| ||||| || || | || ||||| | |||||||| | Sbjct 59843 CTTTGAGAGCACCCCAGTCCCATAGGTCTGTGGGCGTTTTGTTCCACATGTCGTATTGCA 59784 Query 68927 GAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTA 68986 || || | || | | || || ||||||||| || | ||||| | Sbjct 59783 AGATGCCCTGGCTCACCGGACAGCCCGGGTAAGTTTCATAAACGCCAATTTTCTCAGCGA 59724 Query 68987 GTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT 69046 | || || ||||| ||||| ||||| || ||||| ||||||||||||| | ||| | Sbjct 59723 GCTCGCAGCTTGCTTCTAACGCACCATAGTAAATGGTTTCGAAAATCTGTTGATTCAA-- 59666 Query 69047 CTTG--TGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCC 69104 |||| ||| || ||| || | || | | | || | || ||||| |||||||| Sbjct 59665 CTTGATTGCAGCTTCACTTTCATACGGGATACGCATCAGGACGAAAGCATCGGCCAATCC 59606 Query 69105 CTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGG 69164 ||||| || || ||||| || | ||| | | | ||||| | | |||||||| || || Sbjct 59605 TTGAACACCGATTCCGATCGGCCGATGCCGCATGTTTGAGTTCTTGGCTTCTGGGATCGG 59546 Query 69165 ATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTT 69224 || | || | ||||| ||||| || ||||| | || || | |||| || || || Sbjct 59545 GTAGAAGTTCACCTCTATGATTTTGTTTAGATTCTGCACGACGATTTTAGTGACTTCTTT 59486 Query 69225 TAGTTTGAGAAAATCAAATCGTC----CATCTATAACAAACATATTCAGTGCTACAGATG 69280 ||| || ||| | | | ||| |||| | || || | |||||||| || || | Sbjct 59485 TAGCTTCTCAAAGTTATA-CGTTTTGTCATCATTGACGAATCTGTTCAGTGCGACGGACG 59427 Query 69281 CTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGAT 69340 | | |||||| || || || |||| | | || | | ||||| || || |||| Sbjct 59426 CCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCAACGATCTCCGTGCAGAGAT 59367 Query 69341 TACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGT 69400 |||| ||||||||||| ||||| || | ||||| || || |||| || ||||| |||| Sbjct 59366 TACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGTTGCATGCGTCTTTGT 59307 Query 69401 AAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCC 69460 |||| || | || || || ||||| | || | ||| || |||| ||||| | || Sbjct 59306 AAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATGATAGCCTTCCACAAAACTT 59247 Query 69461 TAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGA 69520 || | | | || || || ||||||| ||||||| | ||||| | |||| Sbjct 59246 GCGCTCTCACTTGCCTCACATATCGTTTCTCTTGTTCATATCGCTCATATAACTTCTCGA 59187 Query 69521 ATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACA 69580 | || || ||||| || ||| || ||||| || | || ||||| | ||| Sbjct 59186 ACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGTGGGGGCACATGAGGCTCCATT 59127 Query 69581 CATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGAT 69640 | | | || |||| |||||| || | || || ||||| || | ||| || | Sbjct 59126 CGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTATCCAGAGCCCATAAAAAAGCT 59067 Query 69641 CTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATAT 69700 |||| | | | ||| || || || || ||||| || ||||| | ||||| | |||| Sbjct 59066 CTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTGAGATCCAAGAACTCAAATATAT 59007 Query 69701 CAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGAT 69760 | | ||||| || || || || | ||| | | | || |||||||| || || || || | Sbjct 59006 CCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTCGTTTGTTCCCGCCTTGGT 58947 Query 69761 CTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTAC 69820 | | ||| || || ||||| |||||||| | ||||| || | | || || || | Sbjct 58946 CGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAGACGC 58887 Query 69821 CATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTAT 69878 | || ||||| | || || ||| | ||||| || | | || || | || || Sbjct 58886 CGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGCAGT-GTACGTGA-ACGCCGAT 58829 Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTAT 69938 || || || ||| ||||| || || ||| |||| | ||||| || || ||||| || Sbjct 58828 ACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCGAT 58769 Query 69939 GCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998 ||| || || ||||| | || || ||| || | || | | || |||| Sbjct 58768 GCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTGGGGGCGGGGCGTGGCCGC 58709 Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058 || | || || ||||| ||||| | || || || ||||| ||||| || | Sbjct 58708 CGAGAACAGCGTGGGGCTCGCGTGCGTGAAGTACTTCTCTGACAGCAGGTTGTACGTGTT 58649 Query 70059 AATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117 ||||| || || || ||| | | | ||||| || || | || ||||||| ||| |||| Sbjct 58648 GATAGCGGAGTCGATGTCCTCGCCG-TGAATGCCGATGGAAACTCGCATCAGCATGTGCT 58590 Query 70118 GAGGTCGTTC 70127 | || || || Sbjct 58589 GGGGACGCTC 58580 Score = 107 bits (118), Expect = 3e-18 Identities = 117/154 (76%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 70343 GtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGT 70402 ||||||| || |||||||| || || |||||||| | ||||||||||||||| || |||| Sbjct 55892 GTTTTTTAGTCTCCTTGTGCAAGTTGGATATGGCGAGTCTGGCTGCTAGAATGGCGTAGT 55833 Query 70403 CAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAG 70462 | ||||| | || || ||||| ||| | |||||||| || |||| ||||||| | Sbjct 55832 CCGGATGGTTGGTGGTCATCGTAGCCGCTGTCTCCGCAGCCAAGTTATCCAATTCTACGG 55773 Query 70463 TTGTAACTCCGTTATATA-GCCCTTGAATAACTT 70495 | || ||||| ||||| ||| ||| || ||| Sbjct 55772 TGGTGACTCCAGAATATATGCCGCTGATTACCTT 55739 >seq4 Length=362500 Score = 105 bits (116), Expect = 9e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 162490 TCTGTTATGACCCCTATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCA 162549 ||| ||||||| || || || ||| | || ||| | ||| | |||||| | | |||| Sbjct 26026 TCTCTTATGACACCAGTTCTACCGATGTTGGCTGAAGCCTGCAAATCCGTTGAAATGGCA 25967 Query 162550 TTTAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAA 162609 | ||||||| |||| ||| ||||| | ||| ||||||||||||||||||| |||||| Sbjct 25966 ATGAAAAAATGTCCAAATGGAATGTTCTCGGAAATCAAATATGATGGTGAACGTGTGCAA 25907 Query 162610 GTTCATAAAAA 162620 ||||||||||| Sbjct 25906 GTTCATAAAAA 25896 >seq137 Length=194913 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 39887 TATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAAT 39946 || ||||| || | |||| ||||| ||||| || | || || || || ||||| ||| Sbjct 27394 TAAGTATCGATGAGCAGAGAGTACATCTCTGAGTGTACATTCTCCATTGCAATCTGGAAT 27453 Query 39947 CCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTT 40006 || || || |||||||||||||| | || || ||| | | ||||| ||| |||| || Sbjct 27454 CCATAGAAGCATCTTGCTTCAGTGACCTGCACTTCTTGAGAGAATCTCTCCACCAAGTTC 27513 Query 40007 TCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAA 40059 ||||| || || ||||| || || || || |||| || ||||| || || Sbjct 27514 TCATTGACAATGCCATCGGAGGCCGCGAAGAAAGCCAGGACGTGTTTGATGAA 27566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686687263325640