Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq955 318 8e-82
seq4 105 9e-18
seq137 91.5 2e-13
>seq955
Length=106330
Score = 318 bits (352), Expect = 8e-82
Identities = 1131/1750 (65%), Gaps = 28/1750 (2%)
Strand=Plus/Minus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|| ||||| || | || || ||||| || ||||||| ||| | ||||| ||| ||
Sbjct 60318 GCCGGTTTCGTCCTCAGGTAATACATGCCAGTTTTCAAACCCATTTTCCATGCGTGAAAG 60259
Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514
|| || ||||| ||| ||| | || || || | |||||| || | || || ||
Sbjct 60258 TGAATTGATGTTAATTTACCATAGTTGGGTTCAGCCACATGAATGTTGAATGACTGGCTC 60199
Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTT-TTGA--GGAATT 68571
|| || || ||||| |||| ||| || ||||| | ||| ||| | |||| | |||
Sbjct 60198 TGGTCTATAAAAGCCCCTCGATCAGCTGCCATCTG---AATGCTCGTCTTGACTGAAATC 60142
Query 68572 TCCCAAATAGTCTT--AAAAATCTGTTTGATATCATCTGGAAG-GCTCG--TATTTTGAA 68626
||||| | ||||| | || ||| || || || | |||| ||| ||||||| |
Sbjct 60141 TCCCAGACTGTCTTGTACAATTCTCTT--ATTTCTTTGGGAATAGCTTCAATATTTTGGA 60084
Query 68627 TGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCG 68686
|||||| | | || |||| || || || || |||| |||||| | ||| |
Sbjct 60083 CAGATCCATTGTTGTGAATGATTAGGTTTTTCATATCTTCATCCCACAAGTCCGCCTCGG 60024
Query 68687 TTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAG 68746
| | | ||| || ||||| | || || | || || || || || | || || ||
Sbjct 60023 TCAGATCTCGCAGCAGATGATGGTTCACGACCTGGAACTCGCCCGACAGGACCCTGCGCT 59964
Query 68747 TGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTG 68806
||| || ||| ||| | || || | || || ||||| || || ||||| || || |
Sbjct 59963 GGTAGATGTTAGACGTAAAAGGCTCGAAGGACTCGTTATTGCCGAGGATTTGTGCGGTGG 59904
Query 68807 ATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTAT 68866
| || || ||||| ||||| | || | |||| ||||||||| | |||||| |
Sbjct 59903 AGGCGGTGGGCATCGGTGCTAATAAGAGCGAGTTTCGGAGACCATGTTTAGCGATTTTTT 59844
Query 68867 CTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTA 68926
|||| ||| ||| ||||| || || | || ||||| | |||||||| |
Sbjct 59843 CTTTGAGAGCACCCCAGTCCCATAGGTCTGTGGGCGTTTTGTTCCACATGTCGTATTGCA 59784
Query 68927 GAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTA 68986
|| || | || | | || || ||||||||| || | ||||| |
Sbjct 59783 AGATGCCCTGGCTCACCGGACAGCCCGGGTAAGTTTCATAAACGCCAATTTTCTCAGCGA 59724
Query 68987 GTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT 69046
| || || ||||| ||||| ||||| || ||||| ||||||||||||| | ||| |
Sbjct 59723 GCTCGCAGCTTGCTTCTAACGCACCATAGTAAATGGTTTCGAAAATCTGTTGATTCAA-- 59666
Query 69047 CTTG--TGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCC 69104
|||| ||| || ||| || | || | | | || | || ||||| ||||||||
Sbjct 59665 CTTGATTGCAGCTTCACTTTCATACGGGATACGCATCAGGACGAAAGCATCGGCCAATCC 59606
Query 69105 CTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGG 69164
||||| || || ||||| || | ||| | | | ||||| | | |||||||| || ||
Sbjct 59605 TTGAACACCGATTCCGATCGGCCGATGCCGCATGTTTGAGTTCTTGGCTTCTGGGATCGG 59546
Query 69165 ATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTT 69224
|| | || | ||||| ||||| || ||||| | || || | |||| || || ||
Sbjct 59545 GTAGAAGTTCACCTCTATGATTTTGTTTAGATTCTGCACGACGATTTTAGTGACTTCTTT 59486
Query 69225 TAGTTTGAGAAAATCAAATCGTC----CATCTATAACAAACATATTCAGTGCTACAGATG 69280
||| || ||| | | | ||| |||| | || || | |||||||| || || |
Sbjct 59485 TAGCTTCTCAAAGTTATA-CGTTTTGTCATCATTGACGAATCTGTTCAGTGCGACGGACG 59427
Query 69281 CTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGAT 69340
| | |||||| || || || |||| | | || | | ||||| || || ||||
Sbjct 59426 CCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCAACGATCTCCGTGCAGAGAT 59367
Query 69341 TACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGT 69400
|||| ||||||||||| ||||| || | ||||| || || |||| || ||||| ||||
Sbjct 59366 TACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGTTGCATGCGTCTTTGT 59307
Query 69401 AAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCC 69460
|||| || | || || || ||||| | || | ||| || |||| ||||| | ||
Sbjct 59306 AAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATGATAGCCTTCCACAAAACTT 59247
Query 69461 TAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGA 69520
|| | | | || || || ||||||| ||||||| | ||||| | ||||
Sbjct 59246 GCGCTCTCACTTGCCTCACATATCGTTTCTCTTGTTCATATCGCTCATATAACTTCTCGA 59187
Query 69521 ATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACA 69580
| || || ||||| || ||| || ||||| || | || ||||| | |||
Sbjct 59186 ACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGTGGGGGCACATGAGGCTCCATT 59127
Query 69581 CATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGAT 69640
| | | || |||| |||||| || | || || ||||| || | ||| || |
Sbjct 59126 CGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTATCCAGAGCCCATAAAAAAGCT 59067
Query 69641 CTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATAT 69700
|||| | | | ||| || || || || ||||| || ||||| | ||||| | ||||
Sbjct 59066 CTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTGAGATCCAAGAACTCAAATATAT 59007
Query 69701 CAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGAT 69760
| | ||||| || || || || | ||| | | | || |||||||| || || || || |
Sbjct 59006 CCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTCGTTTGTTCCCGCCTTGGT 58947
Query 69761 CTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTAC 69820
| | ||| || || ||||| |||||||| | ||||| || | | || || || |
Sbjct 58946 CGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAGACGC 58887
Query 69821 CATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTAT 69878
| || ||||| | || || ||| | ||||| || | | || || | || ||
Sbjct 58886 CGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGCAGT-GTACGTGA-ACGCCGAT 58829
Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTAT 69938
|| || || ||| ||||| || || ||| |||| | ||||| || || ||||| ||
Sbjct 58828 ACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCGAT 58769
Query 69939 GCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998
||| || || ||||| | || || ||| || | || | | || ||||
Sbjct 58768 GCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTGGGGGCGGGGCGTGGCCGC 58709
Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058
|| | || || ||||| ||||| | || || || ||||| ||||| || |
Sbjct 58708 CGAGAACAGCGTGGGGCTCGCGTGCGTGAAGTACTTCTCTGACAGCAGGTTGTACGTGTT 58649
Query 70059 AATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117
||||| || || || ||| | | | ||||| || || | || ||||||| ||| ||||
Sbjct 58648 GATAGCGGAGTCGATGTCCTCGCCG-TGAATGCCGATGGAAACTCGCATCAGCATGTGCT 58590
Query 70118 GAGGTCGTTC 70127
| || || ||
Sbjct 58589 GGGGACGCTC 58580
Score = 107 bits (118), Expect = 3e-18
Identities = 117/154 (76%), Gaps = 1/154 (1%)
Strand=Plus/Minus
Query 70343 GtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGT 70402
||||||| || |||||||| || || |||||||| | ||||||||||||||| || ||||
Sbjct 55892 GTTTTTTAGTCTCCTTGTGCAAGTTGGATATGGCGAGTCTGGCTGCTAGAATGGCGTAGT 55833
Query 70403 CAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAG 70462
| ||||| | || || ||||| ||| | |||||||| || |||| ||||||| |
Sbjct 55832 CCGGATGGTTGGTGGTCATCGTAGCCGCTGTCTCCGCAGCCAAGTTATCCAATTCTACGG 55773
Query 70463 TTGTAACTCCGTTATATA-GCCCTTGAATAACTT 70495
| || ||||| ||||| ||| ||| || |||
Sbjct 55772 TGGTGACTCCAGAATATATGCCGCTGATTACCTT 55739
>seq4
Length=362500
Score = 105 bits (116), Expect = 9e-18
Identities = 102/131 (78%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 162490 TCTGTTATGACCCCTATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCA 162549
||| ||||||| || || || ||| | || ||| | ||| | |||||| | | ||||
Sbjct 26026 TCTCTTATGACACCAGTTCTACCGATGTTGGCTGAAGCCTGCAAATCCGTTGAAATGGCA 25967
Query 162550 TTTAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAA 162609
| ||||||| |||| ||| ||||| | ||| ||||||||||||||||||| ||||||
Sbjct 25966 ATGAAAAAATGTCCAAATGGAATGTTCTCGGAAATCAAATATGATGGTGAACGTGTGCAA 25907
Query 162610 GTTCATAAAAA 162620
|||||||||||
Sbjct 25906 GTTCATAAAAA 25896
>seq137
Length=194913
Score = 91.5 bits (100), Expect = 2e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 39887 TATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAAT 39946
|| ||||| || | |||| ||||| ||||| || | || || || || ||||| |||
Sbjct 27394 TAAGTATCGATGAGCAGAGAGTACATCTCTGAGTGTACATTCTCCATTGCAATCTGGAAT 27453
Query 39947 CCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTT 40006
|| || || |||||||||||||| | || || ||| | | ||||| ||| |||| ||
Sbjct 27454 CCATAGAAGCATCTTGCTTCAGTGACCTGCACTTCTTGAGAGAATCTCTCCACCAAGTTC 27513
Query 40007 TCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAA 40059
||||| || || ||||| || || || || |||| || ||||| || ||
Sbjct 27514 TCATTGACAATGCCATCGGAGGCCGCGAAGAAAGCCAGGACGTGTTTGATGAA 27566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686687263325640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |