Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq955 125 9e-24 >seq955 Length=106330 Score = 125 bits (138), Expect = 9e-24 Identities = 554/862 (64%), Gaps = 19/862 (2%) Strand=Plus/Minus Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766 || |||| ||||||| ||||||||| | |||||| |||||||| | || Sbjct 59439 AGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCAACGATC 59380 Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826 |||||||| | || | || || ||||||| |||||||||||| || |||| Sbjct 59379 TCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGTTG 59320 Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886 || || || ||||||||||||||||| ||||| || || ||| | | | |||||| Sbjct 59319 CATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATGATAGCC 59260 Query 118887 TTCCAGACATCGGCAGCTGGCACAGTGGCGT--TGGCTCGCCCCTCTTCCTCGTACTTTG 118944 ||||| | | | ||| | || | || | ||| ||||| || || | | Sbjct 59259 TTCCACAAAACTTGCGCT--CTCACTTGCCTCACATATCGTTTCTCTTGTTCATA--TCG 59204 Query 118945 TGTAGAGGGCT--TCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002 | | || || ||||| || ||| | || | || || || | | || Sbjct 59203 CTCATATAACTTCTCGAACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGTGGGG 59144 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 ||| | ||| ||||| || ||| || | |||||||| | |||||| ||||| Sbjct 59143 GCACATGAGGCTCCATTCGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTATCCA 59084 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTT-CTTCATCCCCCTGATTGAGACGCAACT 119121 |||| | | || || || | |||| ||| || | |||| || || | | | Sbjct 59083 GAGCCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTG-AGAT 59025 Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 119181 |||| || || | ||||||||||||||||| || ||||| ||||||| | || | Sbjct 59024 CCAAGAACTCAAATATATCCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTC 58965 Query 119182 G--ACGACCAGCC-TGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238 | || ||| |||| || ||||| || ||| |||| | || || ||||| || | Sbjct 58964 GTTTGTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTA 58905 Query 119239 TGATACCATCGGATTGGCCATTTG-TCCCCCGA-ATACGAGACTTATTGGCTCTGACATC 119296 || || | ||| ||| || | ||| ||| || || | ||||| | || Sbjct 58904 CGAGGCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAGGATCC--CTTGGCGCGGATGCA 58847 Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 ||| | ||| | || ||||| || || | || ||||| ||||||| | |||| | Sbjct 58846 GTGTACGTGAACGCCGATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGT 58787 Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416 | ||||||| || ||||| ||| |||| | ||||||||||||||| || | || Sbjct 58786 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTG 58727 Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGG 119475 || | ||| || | || ||| || || || ||||||| |||| ||| | | | Sbjct 58726 GGGGCGGGGCGTGGCCGCCGAGAACAGCGTGGGGCTCGCGTGCGTGAA-GTACTTCTCTG 58668 Query 119476 ACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 119535 ||| | || ||| || | | ||| | ||||| || |||||||| ||||| || | Sbjct 58667 ACAGCAGGTTGTACGTGTTGATAGCGGAGTCGATGTCCTCGCCGTGAATGCCGATGGAAA 58608 Query 119536 CCCGCATAAACATGTATTGGGG 119557 | ||||| | ||||| ||||| Sbjct 58607 CTCGCATCAGCATGTGCTGGGG 58586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618235746917560