Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq955 125 9e-24
>seq955
Length=106330
Score = 125 bits (138), Expect = 9e-24
Identities = 554/862 (64%), Gaps = 19/862 (2%)
Strand=Plus/Minus
Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 118766
|| |||| ||||||| ||||||||| | |||||| |||||||| | ||
Sbjct 59439 AGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCAACGATC 59380
Query 118767 TCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 118826
|||||||| | || | || || ||||||| |||||||||||| || ||||
Sbjct 59379 TCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGTTG 59320
Query 118827 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 118886
|| || || ||||||||||||||||| ||||| || || ||| | | | ||||||
Sbjct 59319 CATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATGATAGCC 59260
Query 118887 TTCCAGACATCGGCAGCTGGCACAGTGGCGT--TGGCTCGCCCCTCTTCCTCGTACTTTG 118944
||||| | | | ||| | || | || | ||| ||||| || || | |
Sbjct 59259 TTCCACAAAACTTGCGCT--CTCACTTGCCTCACATATCGTTTCTCTTGTTCATA--TCG 59204
Query 118945 TGTAGAGGGCT--TCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002
| | || || ||||| || ||| | || | || || || | | ||
Sbjct 59203 CTCATATAACTTCTCGAACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGTGGGG 59144
Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062
||| | ||| ||||| || ||| || | |||||||| | |||||| |||||
Sbjct 59143 GCACATGAGGCTCCATTCGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTATCCA 59084
Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTT-CTTCATCCCCCTGATTGAGACGCAACT 119121
|||| | | || || || | |||| ||| || | |||| || || | | |
Sbjct 59083 GAGCCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTG-AGAT 59025
Query 119122 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 119181
|||| || || | ||||||||||||||||| || ||||| ||||||| | || |
Sbjct 59024 CCAAGAACTCAAATATATCCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTC 58965
Query 119182 G--ACGACCAGCC-TGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAA 119238
| || ||| |||| || ||||| || ||| |||| | || || ||||| || |
Sbjct 58964 GTTTGTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTA 58905
Query 119239 TGATACCATCGGATTGGCCATTTG-TCCCCCGA-ATACGAGACTTATTGGCTCTGACATC 119296
|| || | ||| ||| || | ||| ||| || || | ||||| | ||
Sbjct 58904 CGAGGCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAGGATCC--CTTGGCGCGGATGCA 58847
Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356
||| | ||| | || ||||| || || | || ||||| ||||||| | |||| |
Sbjct 58846 GTGTACGTGAACGCCGATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGT 58787
Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416
| ||||||| || ||||| ||| |||| | ||||||||||||||| || | ||
Sbjct 58786 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTG 58727
Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGG 119475
|| | ||| || | || ||| || || || ||||||| |||| ||| | | |
Sbjct 58726 GGGGCGGGGCGTGGCCGCCGAGAACAGCGTGGGGCTCGCGTGCGTGAA-GTACTTCTCTG 58668
Query 119476 ACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 119535
||| | || ||| || | | ||| | ||||| || |||||||| ||||| || |
Sbjct 58667 ACAGCAGGTTGTACGTGTTGATAGCGGAGTCGATGTCCTCGCCGTGAATGCCGATGGAAA 58608
Query 119536 CCCGCATAAACATGTATTGGGG 119557
| ||||| | ||||| |||||
Sbjct 58607 CTCGCATCAGCATGTGCTGGGG 58586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618235746917560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |