Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq955 176 5e-39
>seq955
Length=106330
Score = 176 bits (194), Expect = 5e-39
Identities = 338/493 (69%), Gaps = 4/493 (1%)
Strand=Plus/Plus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|||||||| |||||||| | || || |||||| || | ||| | ||| ||| |
Sbjct 58673 AAGTACTTCACGCACGCGAGCCCCACGCTGTTCTCGGCGGCCACGCCCCGCCCCCAGCTC 58732
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
|| ||||||||| | || |||||||| ||| ||||| ||||||||||| ||||||
Sbjct 58733 TCCTCCTGCTTCCTCATCGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTC 58792
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGT 53445
|| | || || | ||||||||| | |||| |||||||| | ||| | | | | |
Sbjct 58793 AAACATTGCGCGCTCATCTCCAAATCAGCGGGCGGTATCGGCGTTCACGTACAC-TGCAT 58851
Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505
||| || || || | ||| || || ||||||||| || | || |||| || ||
Sbjct 58852 CCGCGCCAAGGGATCCTACATCGCCGGAACCAACGGCGTCTCCAACGGCCTCGTACCCAT 58911
Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGG 53565
||||||||||| |||||||| || |||||||| |||| || || || || ||
Sbjct 58912 GCTCCGCGTCTATAACAACACAGCTAGGTACGTCGACCAAGGCGGGAACAAACGACCCGG 58971
Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625
| ||||| |||||||||||||||||||||| || || | ||||| | || || |
Sbjct 58972 CGCCTTCGCGGTCTACCTCGAGCCGTGGCACGCGGATATATTTGAGTTCTTGGATCT-CA 59030
Query 53626 TCTGAATCA-GGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTC 53684
|| || || | || || | ||| | || || ||| | || ||||| |
Sbjct 59031 AGAAAAACACTGGGAAGGAGGAAGTTCGCGCAAGAGAGCTTTTTTATGGGCTCTGGATAC 59090
Query 53685 CGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG 53744
| ||| | |||||| ||| || |||| ||| || ||| ||| |||||||| |||
Sbjct 59091 CAGACTTGTTCATGAAAAGAGTCGAGAGCAACGGCGAATGGAGCCTCATGTGCCCCCACG 59150
Query 53745 AGTGCCCCGGCCT 53757
| || ||||||||
Sbjct 59151 ACTGTCCCGGCCT 59163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547039515999800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |