Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq955 176 5e-39 >seq955 Length=106330 Score = 176 bits (194), Expect = 5e-39 Identities = 338/493 (69%), Gaps = 4/493 (1%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| |||||||| | || || |||||| || | ||| | ||| ||| | Sbjct 58673 AAGTACTTCACGCACGCGAGCCCCACGCTGTTCTCGGCGGCCACGCCCCGCCCCCAGCTC 58732 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || ||||||||| | || |||||||| ||| ||||| ||||||||||| |||||| Sbjct 58733 TCCTCCTGCTTCCTCATCGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTC 58792 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGT 53445 || | || || | ||||||||| | |||| |||||||| | ||| | | | | | Sbjct 58793 AAACATTGCGCGCTCATCTCCAAATCAGCGGGCGGTATCGGCGTTCACGTACAC-TGCAT 58851 Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505 ||| || || || | ||| || || ||||||||| || | || |||| || || Sbjct 58852 CCGCGCCAAGGGATCCTACATCGCCGGAACCAACGGCGTCTCCAACGGCCTCGTACCCAT 58911 Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGG 53565 ||||||||||| |||||||| || |||||||| |||| || || || || || Sbjct 58912 GCTCCGCGTCTATAACAACACAGCTAGGTACGTCGACCAAGGCGGGAACAAACGACCCGG 58971 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 | ||||| |||||||||||||||||||||| || || | ||||| | || || | Sbjct 58972 CGCCTTCGCGGTCTACCTCGAGCCGTGGCACGCGGATATATTTGAGTTCTTGGATCT-CA 59030 Query 53626 TCTGAATCA-GGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTC 53684 || || || | || || | ||| | || || ||| | || ||||| | Sbjct 59031 AGAAAAACACTGGGAAGGAGGAAGTTCGCGCAAGAGAGCTTTTTTATGGGCTCTGGATAC 59090 Query 53685 CGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG 53744 | ||| | |||||| ||| || |||| ||| || ||| ||| |||||||| ||| Sbjct 59091 CAGACTTGTTCATGAAAAGAGTCGAGAGCAACGGCGAATGGAGCCTCATGTGCCCCCACG 59150 Query 53745 AGTGCCCCGGCCT 53757 | || |||||||| Sbjct 59151 ACTGTCCCGGCCT 59163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547039515999800