Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq11548 89.7 5e-13 >seq11548 Length=10572 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 |||||| | ||| | ||||| |||||||||| ||||| || || || ||| Sbjct 5355 GAACCCAGCCGACCGGAGGATGCTGATGTGCGCTTGGAATCCATCAGACCTGAACAAGAT 5414 Query 34579 GGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTG 34638 ||| || || || |||||| |||| || ||| |||| || | || |||||||||| Sbjct 5415 GGCTCTTCCGCCCTGCCACTGCCTCGCTCAGTTCCACGTGGCCAGCGGCAAGCTGTCCTG 5474 Query 34639 CCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTA 34698 | || || || | | |||||||||| | |||||||| ||||| || || || || Sbjct 5475 CATACTGTACCAGAGGAGTGCAGACATGGGGCTTGGGGTGCCCTTCAATATAGCCAGCTA 5534 Query 34699 CGCTCTGCTCACGTACATGATCGCTCA 34725 | ||||| || |||||||||| || Sbjct 5535 TTCACTGCTGACTCACATGATCGCACA 5561 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || |||||||||| || ||||| | || || || || ||||| |||||||| | |||| Sbjct 5561 TGTGCGATCATGTGAGTCAGCAGTGAATAGCTGGCTATATTGAAGGGCACCCCAAGCCCC 5502 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||| | | || || || ||||||||||| || | || |||| ||| || Sbjct 5501 ATGTCTGCACTCCTCTGGTACAGTATGCAGGACAGCTTGCCGCTGGCCACGTGGAACTGA 5442 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCAC 6799 |||| |||||| || || || |||||| || || || ||||| |||||| Sbjct 5441 GCGAGGCAGTGGCAGGGCGGAAGAGCCATCTTGTTCAGGTCTGATGGATTCCAAGCGCAC 5382 Query 6800 ATCACGATCCTTCTGTCATCAGGGTTC 6826 |||| ||||| | ||| | |||||| Sbjct 5381 ATCAGCATCCTCCGGTCGGCTGGGTTC 5355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448117829772720