Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq3754 96.9 2e-15
seq3664 96.9 2e-15
seq4530 84.2 2e-11
>seq3754
Length=50117
Score = 96.9 bits (106), Expect = 2e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
|||||||| || ||||| || ||||| || | ||||| || || ||||| ||||
Sbjct 1549 GACAAAGAGGGAATTCCGCCAGACCAGCAGCGTCTGATTTTCGCTGGCAAACAGCTGGAG 1608
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| ||||| |||| |||||||||||||||||||| ||| | ||||||||| |
Sbjct 1609 GACGGACGCACTCTGTCGGATTACAACATCCAAAAAGAATCCACCCTTCATTTGGTTCTT 1668
Query 28003 CGTTTGCGTGGCGGCG 28018
||| | || |||||||
Sbjct 1669 CGTCTTCGCGGCGGCG 1684
>seq3664
Length=101255
Score = 96.9 bits (106), Expect = 2e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
|||||||| || ||||| || ||||| || | ||||| || || ||||| ||||
Sbjct 96011 GACAAAGAGGGAATTCCGCCAGACCAGCAGCGTCTGATTTTCGCTGGCAAACAGCTGGAG 96070
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| ||||| |||| |||||||||||||||||||| ||| | ||||||||| |
Sbjct 96071 GACGGACGCACTCTGTCGGATTACAACATCCAAAAAGAATCCACCCTTCATTTGGTTCTT 96130
Query 28003 CGTTTGCGTGGCGGCG 28018
||| | || |||||||
Sbjct 96131 CGTCTTCGCGGCGGCG 96146
>seq4530
Length=43051
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| || || || || ||| | ||||| ||| ||||| |||| || ||| ||
Sbjct 13005 ATGCAGATCTTCGTAAAGACTTTGACTGGTAAAACCATTACTCTTGAGGTTGAAGCTTCC 12946
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || | ||| || || ||||| ||||||||||| |||| ||| |
Sbjct 12945 GATACCATTGAGAAT--GTAAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCGGACC 12888
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| | | || |||||||||||||| | || || | |||| |||| || ||||
Sbjct 12887 AGCAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACA 12828
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||| || ||| ||| | || ||||| ||||| ||||||| ||
Sbjct 12827 ACATCCAGAAGGAGTCTACTCTACACTTGGTACTGCGTCTGCGTGGTGG 12779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355750499179527
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |