Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq754 215 4e-51 >seq754 Length=177731 Score = 215 bits (238), Expect = 4e-51 Identities = 576/876 (66%), Gaps = 11/876 (1%) Strand=Plus/Minus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 || ||||| ||||||||||| |||||| | | || ||||| |||||| | || | Sbjct 51594 GCTTACTTCGTCGAATGGGGCGTGTACCCCAGAAAGTTTCCAGTGGACCGTATCCCAGTA 51535 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 || ||| | ||||| | ||||||||||| || ||||| || || || || ||||| ||| Sbjct 51534 CCAAATCTCACGCATCTCCTGTACGGTTTCATCCCAATTTGCGGAGGTGATGGCATTAAC 51475 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 ||| | || || |||||||| | ||| ||||||| || ||| |||| || Sbjct 51474 GACAGTTTGAAGGAGATCGAAGGCAGTTTCCAAGCTCTGCAACGTTCCTGCAGCGGCCGA 51415 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || || ||||||||| | || || || ||||| || |||| ||||| || ||||| Sbjct 51414 GAGGACTTCAAAGTGACAATCCATGATCCATGGGCAGCCTTGCAGAAACCCCAGAAAGGT 51355 Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440 || | | |||||||| || ||||||||||| || || || | ||| | ||| Sbjct 51354 CTGTCTTCTTGGAACGAACCTTACAAAGGCAATTTCGGCCAGCTCATGATGTTGAAACAA 51295 Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTTT 109500 || || ||| || | ||||| || || ||||| || || ||||| || | || || || Sbjct 51294 GCGAAACCTGACCTGAAAATCCTCCCATCCATCGGTGGCTGGACCCTGGCTGATCCATTC 51235 Query 109501 TATTTTATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTTTTA 109560 | ||| | | || | | || |||| | ||||| | ||||||| || || | Sbjct 51234 TTTTTCTTAAATGACAAGACCAAGAGAGACCGTTTCGTCGCATCGGTGAAAGACTTCCTG 51175 Query 109561 CAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAGGGT 109620 ||| ||||||||||| || || || || || ||||||||||| || || ||||| ||| Sbjct 51174 CAAACTTGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGAGGCAAAGGT 51115 Query 109621 GCCAATCCGAGTCTCGGCGACGCAACGCGCGACAGCAAAACGTACATTGCGTTGTTAAAA 109680 ||||| || || || | | | | ||| || | ||| ||| | | || Sbjct 51114 GCCAACCCTGACCTTGGAGGCCCTGAG---GACGGCCATGTCTACGTTGAACTCATGAAG 51058 Query 109681 GAGTTGCGCGCCATGTTGGACGACTTGCAAACGGC---CACCAACAAAACGTACGAATTG 109737 || | || | |||| | | || || | | || || || | ||||| || Sbjct 51057 GAAATACGTGACATGCTCAATGA---GCTATCCGCTGAAACTGGTAAGAAATACGAGCTG 51001 Query 109738 ACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTAC-GCGTCGGCGCA 109796 || |||||| || ||||||| || || || | |||||||| ||| ||| | || || Sbjct 51000 ACTTCCGCCATCAGTGCCGGTTGGGACAAGATCCAAGTGGTCGACTACAGCG-CTGCCCA 50942 Query 109797 ACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAAACAC 109856 | || ||||| | || || | |||| ||||| || ||||| || ||||| || Sbjct 50941 GAAGTACATGGACCATATCTTCCTGATGAGCTACGACTTTAAAGGAGCCTGGTCTAATGA 50882 Query 109857 GGACTTAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATTGTACAC 109916 | | || | || || || ||||||| || |||||| || || || ||||| Sbjct 50881 TACCCTCGGACACCAGACATCTCTGTACGCTCCTGCGTGGATGCCCAAGGAGACTTACAC 50822 Query 109917 GACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaTTATAAT 109976 || ||| | | || ||| ||| || ||| || || || || ||| | | Sbjct 50821 CACTGATTTTGGAGTGAAATTCCTGCTCGCTCAAGGTGTTAACCCCAAGAAGATTGTCGT 50762 Query 109977 TGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCGT 110012 || || || ||||||||||| || ||||| || || Sbjct 50761 AGGTGTTGCTATGTACGGCCGAGGATGGACTGGAGT 50726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409531982289459