Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq754 215 4e-51
>seq754
Length=177731
Score = 215 bits (238), Expect = 4e-51
Identities = 576/876 (66%), Gaps = 11/876 (1%)
Strand=Plus/Minus
Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200
|| ||||| ||||||||||| |||||| | | || ||||| |||||| | || |
Sbjct 51594 GCTTACTTCGTCGAATGGGGCGTGTACCCCAGAAAGTTTCCAGTGGACCGTATCCCAGTA 51535
Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260
|| ||| | ||||| | ||||||||||| || ||||| || || || || ||||| |||
Sbjct 51534 CCAAATCTCACGCATCTCCTGTACGGTTTCATCCCAATTTGCGGAGGTGATGGCATTAAC 51475
Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320
||| | || || |||||||| | ||| ||||||| || ||| |||| ||
Sbjct 51474 GACAGTTTGAAGGAGATCGAAGGCAGTTTCCAAGCTCTGCAACGTTCCTGCAGCGGCCGA 51415
Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380
|| || ||||||||| | || || || ||||| || |||| ||||| || |||||
Sbjct 51414 GAGGACTTCAAAGTGACAATCCATGATCCATGGGCAGCCTTGCAGAAACCCCAGAAAGGT 51355
Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440
|| | | |||||||| || ||||||||||| || || || | ||| | |||
Sbjct 51354 CTGTCTTCTTGGAACGAACCTTACAAAGGCAATTTCGGCCAGCTCATGATGTTGAAACAA 51295
Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACGTTGTCGGACCCGTTT 109500
|| || ||| || | ||||| || || ||||| || || ||||| || | || || ||
Sbjct 51294 GCGAAACCTGACCTGAAAATCCTCCCATCCATCGGTGGCTGGACCCTGGCTGATCCATTC 51235
Query 109501 TATTTTATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTTTTA 109560
| ||| | | || | | || |||| | ||||| | ||||||| || || |
Sbjct 51234 TTTTTCTTAAATGACAAGACCAAGAGAGACCGTTTCGTCGCATCGGTGAAAGACTTCCTG 51175
Query 109561 CAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAGGGT 109620
||| ||||||||||| || || || || || ||||||||||| || || ||||| |||
Sbjct 51174 CAAACTTGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGAGGCAAAGGT 51115
Query 109621 GCCAATCCGAGTCTCGGCGACGCAACGCGCGACAGCAAAACGTACATTGCGTTGTTAAAA 109680
||||| || || || | | | | ||| || | ||| ||| | | ||
Sbjct 51114 GCCAACCCTGACCTTGGAGGCCCTGAG---GACGGCCATGTCTACGTTGAACTCATGAAG 51058
Query 109681 GAGTTGCGCGCCATGTTGGACGACTTGCAAACGGC---CACCAACAAAACGTACGAATTG 109737
|| | || | |||| | | || || | | || || || | ||||| ||
Sbjct 51057 GAAATACGTGACATGCTCAATGA---GCTATCCGCTGAAACTGGTAAGAAATACGAGCTG 51001
Query 109738 ACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTAC-GCGTCGGCGCA 109796
|| |||||| || ||||||| || || || | |||||||| ||| ||| | || ||
Sbjct 51000 ACTTCCGCCATCAGTGCCGGTTGGGACAAGATCCAAGTGGTCGACTACAGCG-CTGCCCA 50942
Query 109797 ACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAAACAC 109856
| || ||||| | || || | |||| ||||| || ||||| || ||||| ||
Sbjct 50941 GAAGTACATGGACCATATCTTCCTGATGAGCTACGACTTTAAAGGAGCCTGGTCTAATGA 50882
Query 109857 GGACTTAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATTGTACAC 109916
| | || | || || || ||||||| || |||||| || || || |||||
Sbjct 50881 TACCCTCGGACACCAGACATCTCTGTACGCTCCTGCGTGGATGCCCAAGGAGACTTACAC 50822
Query 109917 GACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaTTATAAT 109976
|| ||| | | || ||| ||| || ||| || || || || ||| | |
Sbjct 50821 CACTGATTTTGGAGTGAAATTCCTGCTCGCTCAAGGTGTTAACCCCAAGAAGATTGTCGT 50762
Query 109977 TGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCGT 110012
|| || || ||||||||||| || ||||| || ||
Sbjct 50761 AGGTGTTGCTATGTACGGCCGAGGATGGACTGGAGT 50726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409531982289459
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |