Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq955 304 2e-77 seq4 105 9e-18 seq137 87.8 2e-12 >seq955 Length=106330 Score = 304 bits (336), Expect = 2e-77 Identities = 1019/1572 (65%), Gaps = 18/1572 (1%) Strand=Plus/Minus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || ||||| || | || || ||||| |||||||| | ||||| ||||| ||| || Sbjct 60318 GCCGGTTTCGTCCTCAGGTAATACATGCCAGTTTTCAAACCCATTTTCCATGCGTGAAAG 60259 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 || || ||| | ||| ||| | || || || | |||||| || | ||||| || Sbjct 60258 TGAATTGATGTTAATTTACCATAGTTGGGTTCAGCCACATGAATGTTGAATGACTGGCTC 60199 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982 || || || ||||| |||| |||||| ||||| | || | ||||| | ||| ||| Sbjct 60198 TGGTCTATAAAAGCCCCTCGATCAGCTGCCATCTGAATGCTCGTCTTGACTGAAATCTCC 60139 Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG-GTTTG--TATTTTGAATGGAA 77039 || | || ||| | | || | | || || | |||| | || ||||||| | || Sbjct 60138 CAGACTGTCTTGTACAATTCTCTTATTTCTTTGGGAATAGCTTCAATATTTTGGACAGAT 60079 Query 77040 CCACCATC-TGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAA 77098 ||| | ||| || ||| || || ||||| |||| |||||| | | ||| || | Sbjct 60078 CCATTGTTGTGA-ATGATTAGGTTTTTCATATCTTCATCCCACAAGTCCGCCTCGGTCAG 60020 Query 77099 AACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTA 77158 | ||| || |||||| | || || | || || || || |||| || || || ||| Sbjct 60019 ATCTCGCAGCAGATGATGGTTCACGACCTGGAACTCGCCCGACAGGACCCTGCGCTGGTA 59960 Query 77159 AATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGC 77218 || ||| ||| | || || | || || || || || | ||||| || || || || Sbjct 59959 GATGTTAGACGTAAAAGGCTCGAAGGACTCGTTATTGCCGAGGATTTGTGCGGTGGAGGC 59900 Query 77219 AGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTT 77278 || ||||| ||||| | || | |||| |||||||||| | |||||| ||||| Sbjct 59899 GGTGGGCATCGGTGCTAATAAGAGCGAGTTTCGGAGACCATGTTTAGCGATTTTTTCTTT 59840 Query 77279 TAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAAT 77338 ||| ||| ||||| || |||| || | ||| | |||||||| | || Sbjct 59839 GAGAGCACCCCAGTCCCATAGGTCTGTGGGCGTTTTGTTCCACATGTCGTATTGCAAGAT 59780 Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398 || | || | | || || ||||||||| || | | ||||| || || Sbjct 59779 GCCCTGGCTCACCGGACAGCCCGGGTAAGTTTCATAAACGCCAATTTTCTCAGCGAGCTC 59720 Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458 || || ||||| || || || || ||||| ||||||||||||| | ||| | |||| Sbjct 59719 GCAGCTTGCTTCTAACGCACCATAGTAAATGGTTTCGAAAATCTGTTGATTCAA--CTTG 59662 Query 77459 --TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGA 77516 ||| | ||| ||| |||| | | | || | || ||||| || ||||| ||| Sbjct 59661 ATTGCAGCTTCACTTTCATACGGGATACGCATCAGGACGAAAGCATCGGCCAATCCTTGA 59602 Query 77517 ACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAA 77576 || || || || || || | ||| | | | || || | || |||||||| || || || Sbjct 59601 ACACCGATTCCGATCGGCCGATGCCGCATGTTTGAGTTCTTGGCTTCTGGGATCGGGTAG 59542 Query 77577 TAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGT 77636 | || | ||||| ||||| || ||||| || || | |||| || || ||||| Sbjct 59541 AAGTTCACCTCTATGATTTTGTTTAGATTCTGCACGACGATTTTAGTGACTTCTTTTAGC 59482 Query 77637 TTAAGAAAATCAAATCTTC---CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGA 77693 || ||| | | | || |||| | || || |||||| || | || || | | Sbjct 59481 TTCTCAAAGTTATACGTTTTGTCATCATTGACGAATCTGTTCAGTGCGACGGACGCCAAA 59422 Query 77694 TTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTA 77753 ||||| || || || |||| | | || | | ||||| || || |||||||| Sbjct 59421 TTACACACGGCAACTTCATCCGGCGACGTGTACTCAACGATCTCCGTGCAGAGATTACTG 59362 Query 77754 CATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGA 77813 ||||||||||||||||| || | ||| ||||| || | ||||||| ||| || ||||| Sbjct 59361 CATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGTTGCATGCGTCTTTGTAAAGC 59302 Query 77814 ATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCT 77873 || | || ||||||||||| | || | ||| || |||| ||||| | ||| ||| Sbjct 59301 ATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATGATAGCCTTCCACAAAACTTGCGCT 59242 Query 77874 TTTATCATAGAT-TTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTC 77932 | | | | | ||||| ||||| ||||||| | ||||| | || || || Sbjct 59241 CTCA-CTTGCCTCACATATCGTTTCTCTTGTTCATATCGCTCATATAACTTCTCGAACTC 59183 Query 77933 ATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACC 77992 || ||||| || ||| || || || || | |||||||| | ||| || || Sbjct 59182 GTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGTGGGGGCACATGAGGCTCCATTCGCC 59123 Query 77993 ATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 | || |||| |||||| || | || |||||||| || || ||| || |||| Sbjct 59122 GTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTATCCAGAGCCCATAAAAAAGCTCTCT 59063 Query 78053 GGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGA 78112 | | | ||| || || || || || || || ||||| | ||||| | ||||| | Sbjct 59062 TGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTGAGATCCAAGAACTCAAATATATCCGC 59003 Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTAT 78172 ||||| || || || || | || | | || |||||||| || || || || || | Sbjct 59002 GTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTCGTTTGTTCCCGCCTTGGTCGAC 58943 Query 78173 ATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATT 78232 || || || ||||| ||||| || | | ||| || | | ||||| || || || Sbjct 58942 GTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAGACGCCGTT 58883 Query 78233 TGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCT 78290 ||||| | || || ||| | ||||| || | | || || | || || || Sbjct 58882 GGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGCAGT-GTACGTGA-ACGCCGATACCG 58825 Query 78291 CCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTG 78350 || || || || || || |||||| |||| | || |||||||| ||||| || ||| Sbjct 58824 CCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCGATGCTG 58765 Query 78351 TCATCCATCATG 78362 || ||| ||||| Sbjct 58764 TCGTCCTTCATG 58753 >seq4 Length=362500 Score = 105 bits (116), Expect = 9e-18 Identities = 253/382 (66%), Gaps = 3/382 (1%) Strand=Plus/Minus Query 170961 TATCTGTTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGG 171020 ||||| |||||| || | || ||||| || ||| | || | || ||| | | || Sbjct 26028 TATCTCTTATGACACCAGTTCTACCGATGTTGGCTGAAGCCTGCAAATCCGTTGAAATGG 25969 Query 171021 CATTTAAAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCC 171080 || | ||||||| |||| ||||||||| | ||| | ||||||||||||||||| || | Sbjct 25968 CAATGAAAAAATGTCCAAATGGAATGTTCTCGGAAATCAAATATGATGGTGAACGTGTGC 25909 Query 171081 AAGTTCATAAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTAC 171140 ||||||||||||| | | ||| | || | || | ||||||||| | | Sbjct 25908 AAGTTCATAAAAAGGGGAGCGAGTTTAAATATTTCTCCCGAGCTTTAAAACCAGTTATGC 25849 Query 171141 CACATAAAGTTGATTATCTCAAGGAATACCTTCCTAAAGCATTTAAAAAAGCTACCTCTA 171200 | ||||||||| | || | ||||| | | | ||| |||| ||| |||| | || Sbjct 25848 CGCATAAAGTTAGTCATTTTAAGGATTTCTTACCTCAAGCGTTTCCTAAAGGTGTGGATA 25789 Query 171201 TTATCTTGGATTCCGAAATTGTTCTAGTTGATGAACATAATG---TTCCACTTCCGTTTG 171257 | || |||||| | || || | | ||||||| ||| | ||||| ||||||| Sbjct 25788 TGATTTTGGATGCTGAGGTTTTAATGGTTGATGTGAATACGGGGAAACCACTACCGTTTG 25729 Query 171258 GAAGTCTAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCT 171317 | | |||| || ||||| ||| || | ||| ||| | | ||| ||| || | Sbjct 25728 GTACATTAGGTATTCACAAGAAGTCCGAATTTAAAGGAGCTCAAGTATGTCTGTATGTGT 25669 Query 171318 TTGATTGTTTATACTTTGATGG 171339 |||| || || || | | |||| Sbjct 25668 TTGACTGCTTGTATTATAATGG 25647 >seq137 Length=194913 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/199 (70%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 ||||| ||||||||||| || || ||||| || | ||| ||||| | |||||| || Sbjct 23402 AATGTCAGACCGGGCATCAGACCGCGTTTCTTCATCCAGAATATAGACGCGAAGCTGCCC 23461 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC---T 48308 || ||||||||||| || |||| || ||||| | | ||| ||| | |||| Sbjct 23462 GAGAAGAATATGCCCTCGACGGATGCGAATGCCACGATGCGCTCGCCGAAGGTGGCCGTC 23521 Query 48309 TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368 | | || |||||| | | ||||| || ||||||||||| || || |||| || || Sbjct 23522 TTGCTGCCGATCCACTGGAGCGCCCAGTCCGCCTTCTTCTTGACGCACGGCAGCGTCTCC 23581 Query 48369 ATAGCATTAAAGAGAAAGT 48387 | || || || || |||| Sbjct 23582 ACGGCGTTGAATAGGAAGT 23600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694444760628640