Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq955 304 2e-77
seq4 105 9e-18
seq137 87.8 2e-12
>seq955
Length=106330
Score = 304 bits (336), Expect = 2e-77
Identities = 1019/1572 (65%), Gaps = 18/1572 (1%)
Strand=Plus/Minus
Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862
|| ||||| || | || || ||||| |||||||| | ||||| ||||| ||| ||
Sbjct 60318 GCCGGTTTCGTCCTCAGGTAATACATGCCAGTTTTCAAACCCATTTTCCATGCGTGAAAG 60259
Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922
|| || ||| | ||| ||| | || || || | |||||| || | ||||| ||
Sbjct 60258 TGAATTGATGTTAATTTACCATAGTTGGGTTCAGCCACATGAATGTTGAATGACTGGCTC 60199
Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 76982
|| || || ||||| |||| |||||| ||||| | || | ||||| | ||| |||
Sbjct 60198 TGGTCTATAAAAGCCCCTCGATCAGCTGCCATCTGAATGCTCGTCTTGACTGAAATCTCC 60139
Query 76983 CAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG-GTTTG--TATTTTGAATGGAA 77039
|| | || ||| | | || | | || || | |||| | || ||||||| | ||
Sbjct 60138 CAGACTGTCTTGTACAATTCTCTTATTTCTTTGGGAATAGCTTCAATATTTTGGACAGAT 60079
Query 77040 CCACCATC-TGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAA 77098
||| | ||| || ||| || || ||||| |||| |||||| | | ||| || |
Sbjct 60078 CCATTGTTGTGA-ATGATTAGGTTTTTCATATCTTCATCCCACAAGTCCGCCTCGGTCAG 60020
Query 77099 AACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTA 77158
| ||| || |||||| | || || | || || || || |||| || || || |||
Sbjct 60019 ATCTCGCAGCAGATGATGGTTCACGACCTGGAACTCGCCCGACAGGACCCTGCGCTGGTA 59960
Query 77159 AATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGC 77218
|| ||| ||| | || || | || || || || || | ||||| || || || ||
Sbjct 59959 GATGTTAGACGTAAAAGGCTCGAAGGACTCGTTATTGCCGAGGATTTGTGCGGTGGAGGC 59900
Query 77219 AGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTT 77278
|| ||||| ||||| | || | |||| |||||||||| | |||||| |||||
Sbjct 59899 GGTGGGCATCGGTGCTAATAAGAGCGAGTTTCGGAGACCATGTTTAGCGATTTTTTCTTT 59840
Query 77279 TAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAAT 77338
||| ||| ||||| || |||| || | ||| | |||||||| | ||
Sbjct 59839 GAGAGCACCCCAGTCCCATAGGTCTGTGGGCGTTTTGTTCCACATGTCGTATTGCAAGAT 59780
Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398
|| | || | | || || ||||||||| || | | ||||| || ||
Sbjct 59779 GCCCTGGCTCACCGGACAGCCCGGGTAAGTTTCATAAACGCCAATTTTCTCAGCGAGCTC 59720
Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458
|| || ||||| || || || || ||||| ||||||||||||| | ||| | ||||
Sbjct 59719 GCAGCTTGCTTCTAACGCACCATAGTAAATGGTTTCGAAAATCTGTTGATTCAA--CTTG 59662
Query 77459 --TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGA 77516
||| | ||| ||| |||| | | | || | || ||||| || ||||| |||
Sbjct 59661 ATTGCAGCTTCACTTTCATACGGGATACGCATCAGGACGAAAGCATCGGCCAATCCTTGA 59602
Query 77517 ACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAA 77576
|| || || || || || | ||| | | | || || | || |||||||| || || ||
Sbjct 59601 ACACCGATTCCGATCGGCCGATGCCGCATGTTTGAGTTCTTGGCTTCTGGGATCGGGTAG 59542
Query 77577 TAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGT 77636
| || | ||||| ||||| || ||||| || || | |||| || || |||||
Sbjct 59541 AAGTTCACCTCTATGATTTTGTTTAGATTCTGCACGACGATTTTAGTGACTTCTTTTAGC 59482
Query 77637 TTAAGAAAATCAAATCTTC---CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGA 77693
|| ||| | | | || |||| | || || |||||| || | || || | |
Sbjct 59481 TTCTCAAAGTTATACGTTTTGTCATCATTGACGAATCTGTTCAGTGCGACGGACGCCAAA 59422
Query 77694 TTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTA 77753
||||| || || || |||| | | || | | ||||| || || ||||||||
Sbjct 59421 TTACACACGGCAACTTCATCCGGCGACGTGTACTCAACGATCTCCGTGCAGAGATTACTG 59362
Query 77754 CATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGA 77813
||||||||||||||||| || | ||| ||||| || | ||||||| ||| || |||||
Sbjct 59361 CATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGTTGCATGCGTCTTTGTAAAGC 59302
Query 77814 ATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCT 77873
|| | || ||||||||||| | || | ||| || |||| ||||| | ||| |||
Sbjct 59301 ATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATGATAGCCTTCCACAAAACTTGCGCT 59242
Query 77874 TTTATCATAGAT-TTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTC 77932
| | | | | ||||| ||||| ||||||| | ||||| | || || ||
Sbjct 59241 CTCA-CTTGCCTCACATATCGTTTCTCTTGTTCATATCGCTCATATAACTTCTCGAACTC 59183
Query 77933 ATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACC 77992
|| ||||| || ||| || || || || | |||||||| | ||| || ||
Sbjct 59182 GTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGTGGGGGCACATGAGGCTCCATTCGCC 59123
Query 77993 ATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052
| || |||| |||||| || | || |||||||| || || ||| || ||||
Sbjct 59122 GTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTATCCAGAGCCCATAAAAAAGCTCTCT 59063
Query 78053 GGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGA 78112
| | | ||| || || || || || || || ||||| | ||||| | ||||| |
Sbjct 59062 TGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTGAGATCCAAGAACTCAAATATATCCGC 59003
Query 78113 ATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTAT 78172
||||| || || || || | || | | || |||||||| || || || || || |
Sbjct 59002 GTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTCGTTTGTTCCCGCCTTGGTCGAC 58943
Query 78173 ATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATT 78232
|| || || ||||| ||||| || | | ||| || | | ||||| || || ||
Sbjct 58942 GTACCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAGACGCCGTT 58883
Query 78233 TGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCT 78290
||||| | || || ||| | ||||| || | | || || | || || ||
Sbjct 58882 GGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGCAGT-GTACGTGA-ACGCCGATACCG 58825
Query 78291 CCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTG 78350
|| || || || || || |||||| |||| | || |||||||| ||||| || |||
Sbjct 58824 CCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCGATGCTG 58765
Query 78351 TCATCCATCATG 78362
|| ||| |||||
Sbjct 58764 TCGTCCTTCATG 58753
>seq4
Length=362500
Score = 105 bits (116), Expect = 9e-18
Identities = 253/382 (66%), Gaps = 3/382 (1%)
Strand=Plus/Minus
Query 170961 TATCTGTTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGG 171020
||||| |||||| || | || ||||| || ||| | || | || ||| | | ||
Sbjct 26028 TATCTCTTATGACACCAGTTCTACCGATGTTGGCTGAAGCCTGCAAATCCGTTGAAATGG 25969
Query 171021 CATTTAAAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCC 171080
|| | ||||||| |||| ||||||||| | ||| | ||||||||||||||||| || |
Sbjct 25968 CAATGAAAAAATGTCCAAATGGAATGTTCTCGGAAATCAAATATGATGGTGAACGTGTGC 25909
Query 171081 AAGTTCATAAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTAC 171140
||||||||||||| | | ||| | || | || | ||||||||| | |
Sbjct 25908 AAGTTCATAAAAAGGGGAGCGAGTTTAAATATTTCTCCCGAGCTTTAAAACCAGTTATGC 25849
Query 171141 CACATAAAGTTGATTATCTCAAGGAATACCTTCCTAAAGCATTTAAAAAAGCTACCTCTA 171200
| ||||||||| | || | ||||| | | | ||| |||| ||| |||| | ||
Sbjct 25848 CGCATAAAGTTAGTCATTTTAAGGATTTCTTACCTCAAGCGTTTCCTAAAGGTGTGGATA 25789
Query 171201 TTATCTTGGATTCCGAAATTGTTCTAGTTGATGAACATAATG---TTCCACTTCCGTTTG 171257
| || |||||| | || || | | ||||||| ||| | ||||| |||||||
Sbjct 25788 TGATTTTGGATGCTGAGGTTTTAATGGTTGATGTGAATACGGGGAAACCACTACCGTTTG 25729
Query 171258 GAAGTCTAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCT 171317
| | |||| || ||||| ||| || | ||| ||| | | ||| ||| || |
Sbjct 25728 GTACATTAGGTATTCACAAGAAGTCCGAATTTAAAGGAGCTCAAGTATGTCTGTATGTGT 25669
Query 171318 TTGATTGTTTATACTTTGATGG 171339
|||| || || || | | ||||
Sbjct 25668 TTGACTGCTTGTATTATAATGG 25647
>seq137
Length=194913
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/199 (70%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251
||||| ||||||||||| || || ||||| || | ||| ||||| | |||||| ||
Sbjct 23402 AATGTCAGACCGGGCATCAGACCGCGTTTCTTCATCCAGAATATAGACGCGAAGCTGCCC 23461
Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC---T 48308
|| ||||||||||| || |||| || ||||| | | ||| ||| | ||||
Sbjct 23462 GAGAAGAATATGCCCTCGACGGATGCGAATGCCACGATGCGCTCGCCGAAGGTGGCCGTC 23521
Query 48309 TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368
| | || |||||| | | ||||| || ||||||||||| || || |||| || ||
Sbjct 23522 TTGCTGCCGATCCACTGGAGCGCCCAGTCCGCCTTCTTCTTGACGCACGGCAGCGTCTCC 23581
Query 48369 ATAGCATTAAAGAGAAAGT 48387
| || || || || ||||
Sbjct 23582 ACGGCGTTGAATAGGAAGT 23600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694444760628640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |