Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq4530 95.1 1e-14 >seq4530 Length=43051 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || || || || || |||||||| ||||||||||| | || || | | Sbjct 13461 ATGCAGATCTTCGTTAAGACCTTGACCGGTAAAACCATTACTCTTGAGGTTGAGGCTTCC 13402 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | ||||| ||||| |||||||| ||| ||||| || || Sbjct 13401 GATACTATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAGGGCATTCCCCCGGACCAG 13342 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || || ||||| | ||| || ||||| | |||||| || || | || || || Sbjct 13341 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 13282 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || ||||| || || || || ||||| ||||||||||||||||| Sbjct 13281 ATTCAGAAAGAGTCCACCCTTCACTTAGTATTGCGTCTGCGCGGTGG 13235 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| || ||||| | || |||||||| || || ||||| || || Sbjct 12320 ATGCAAATTTTCGTTAAAACTCTAACTGGCAAAACTATAACTTTGGAAGTTGAGGCCTCT 12261 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || ||| | |||||| ||||| || |||||||| |||| || || Sbjct 12260 GACACTATTGAGAACGTAAAAGCCAAAATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 12201 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || || ||||||| || ||||| || | |||||| ||| | | || || || Sbjct 12200 CAGAGACTTATTTTCGCTGGCAAGCAGCTAGAAGATGGACGCACTCTATCTGACTACAAC 12141 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || |||||||| || || || || ||| |||||||||||||||| Sbjct 12140 ATTCAGAAAGAATCAACCCTTCACTTGGTGCTGCGTCTGCGCGGTGG 12094 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || || || || || ||||| || ||||||||||| | || ||| | | Sbjct 13005 ATGCAGATCTTCGTAAAGACTTTGACTGGTAAAACCATTACTCTTGAGGTTGAAGCTTCC 12946 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | ||||| ||||| |||||||||||| ||||| || || Sbjct 12945 GATACCATTGAGAATGTAAAGGCCAAAATCCAGGACAAAGAAGGCATTCCCCCGGACCAG 12886 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || || ||||| | ||| || ||||| | |||||| || || | || || || Sbjct 12885 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 12826 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || ||||| ||||| || || |||||||||| ||||| Sbjct 12825 ATCCAGAAGGAGTCTACTCTACACTTGGTACTGCGTCTGCGTGGTGG 12779 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || || || || || |||||||| ||||||||||| | || || | | Sbjct 13917 ATGCAGATCTTCGTTAAGACCTTGACCGGTAAAACCATTACTCTTGAGGTTGAGGCTTCC 13858 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | ||||| ||||| |||||||| ||| ||||| || || Sbjct 13857 GATACTATTGAGAACGTAAAGGCCAAAATCCAGGACAAAGAGGGCATTCCCCCAGACCAG 13798 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || || ||||| | ||| || ||||| | |||||| || || | || || || Sbjct 13797 CAGAGACTTATCTTTGCCGGAAAACAGCTAGAAGATGGCCGCACACTGTCAGACTACAAC 13738 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || ||||| || || || || || ||| | |||||||||||||| Sbjct 13737 ATTCAGAAAGAGTCCACCCTTCACTTGGTGCTACGTCTGCGCGGTGG 13691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421678561599976