Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1672 87.8 2e-12 >seq1672 Length=38749 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || ||||| ||||||| | ||||||||| || || | || || || || |||||| Sbjct 32242 ATGTACGTGTCAATCAAAAGGGAGTACATTTCGGAATGCACATTTTCCATCGCAATCTGA 32183 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 ||||| || |||||||| || || | | ||| |||||| | ||||| ||| ||| | Sbjct 32182 AATCCGTAAAAGCATCGGGCTTCGGTGACTTGCACTTCCTGGCTGAATCGCTCCACCAAG 32123 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAA 16632 || || || || || || ||| ||| ||||| || ||||| Sbjct 32122 TTTTCGTTAACAATTCCATCAGATGCTGCAAAGAAGGCCAA 32082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511354296022640