Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq30 95.1 9e-15 >seq30 Length=458414 Score = 95.1 bits (104), Expect = 9e-15 Identities = 269/404 (67%), Gaps = 12/404 (3%) Strand=Plus/Plus Query 101867 ACATAAAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 |||||||| || || ||| ||||| || || || |||||| | | |||||| Sbjct 345155 ACATAAAACTGGGCTAG-ACAGTGACACGGTGGTAATGCCATTTGGAGTAGATCTGAAGG 345213 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTT-ATAGTATCAATCA 101984 |||||| ||| ||| | |||| || || || | ||||| || | ||||| | Sbjct 345214 ATTCCACGCAGTCATGATAATCCGTCGGGAA-TACGGATCATTTTTGATCATGTCAATTA 345272 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATA---ATCGCGCCCAACACCTTTATATT 102041 || | ||| || |||||||||| ||| | ||| ||| | | | ||||| | Sbjct 345273 CTTGCTGTAACTGATCAACTCCTTGTCCCTCATAGTTATCTTTC---ATAGTCTTATACT 345329 Query 102042 CTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGT 102101 ||||||| || || | ||| ||||| |||||||||||||| || || ||||| || | | Sbjct 345330 CTGCTCCAAAGTGACGCCATTGAAAGCCATACACAGGTCCCAGGTCACCTTCCTCCCGAT 345389 Query 102102 CATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGC 102161 || || || | ||| || | ||| || || || ||||||||||||| || | Sbjct 345390 CAGTGAATCCCATTTTGTCCAGGAATTCCCTGGAAGAGTTTCCATCCCAAATGTGAACTC 345449 Query 102162 CAGCTGCTGATAGCTC-TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCA 102220 | ||| ||||| ||||| | ||| |||| | | |||||||| || || || Sbjct 345450 CTTTAGCTTTCAGCTCATTTGC-ATTTGTACATCCCTTCACAAACCACAGAAGCTCCTCC 345508 Query 102221 ACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 |||| ||| ||||||| || | || || || | | |||||| Sbjct 345509 ACAATTCCTTTCCAAAAAACACGTTTGGTGGTCAGCAATGGAAA 345552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361209805353902