Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq159 87.8 1e-12 >seq159 Length=219009 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| |||| || ||||| || || ||||| || || |||||| Sbjct 159705 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACCATCACTTTGGAGGTAGAACCCAGC 159764 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || ||||| || || ||||| |||||| | ||| ||| ||| Sbjct 159765 GACACGATCGAGAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGACCAA 159824 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | ||||| ||||| || ||||| ||||| ||| ||| | | ||||||||| Sbjct 159825 CAGCGTCTTATTTTTGCTGGTAAACAGTTGGAGGATGGACGTACTCTCTCTGATTACAAT 159884 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 ||||| |||||||| ||||| || Sbjct 159885 ATTCAGAAGGAATCGACTCTGCA 159907 Score = 82.4 bits (90), Expect = 6e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167 || ||||| ||||||| || || |||||| | ||| |||||| || | || |||| Sbjct 158409 ATGTCAAGGCAAAAATTCAAGACAAGGAAGGTATTCCCCCAGATCAGCAGCGTCTCATCT 158468 Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227 |||| || |||||||||||||| | ||| || | || |||||||| || ||||| | Sbjct 158469 TTGCTGGTAAACAATTGGAAGACGGCCGAACACTGTCGGACTACAATATCCAGAAGGAGT 158528 Query 25228 CTACTCTTCA 25237 | || ||||| Sbjct 158529 CCACCCTTCA 158538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410749728078428