Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq30 114 9e-21 >seq30 Length=458414 Score = 114 bits (126), Expect = 9e-21 Identities = 184/262 (70%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 97344 AATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATA 97403 ||||| |||| ||| |||||||| |||| ||| |||| || | || | | | ||| Sbjct 345268 AATTACTTGCTGTAACTGATCAACTCCTTGTCCCTCATAGTTATCTTTCATAGTCTTATA 345327 Query 97404 TTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCT 97463 ||||||||||| || | |||||| || ||||| |||||||| ||||| ||||| || | Sbjct 345328 CTCTGCTCCAAAGTGACGCCATTGAAAGCCATACACAGGTCCCAGGTCACCTTCCTCCCG 345387 Query 97464 ATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCAC 97523 |||| ||| || | || || | | ||| || ||| ||||||||||||| || Sbjct 345388 ATCAGTGAATCCCATTTTGTCCAGGAATTCCCTGGAAGAGTTTCCATCCCAAATGTGAAC 345447 Query 97524 ACCAGATGCTGCAAGCTC-TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTT 97582 || ||| ||||| ||||| | ||| |||| | | |||||||| | || | Sbjct 345448 TCCTTTAGCTTTCAGCTCATTTGC-ATTTGTACATCCCTTCACAAACCACAGAAGCTCCT 345506 Query 97583 CCACAACACCTCTCCAAAATAC 97604 |||||| ||| ||||||| || Sbjct 345507 CCACAATTCCTTTCCAAAAAAC 345528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346744263105140