Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq159 132 4e-26 seq47 107 2e-18 seq263 104 2e-17 seq463 98.7 9e-16 >seq159 Length=219009 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| |||||| || ||||| || ||||| ||||| | ||||| ||| || | ||| Sbjct 158994 TGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGC 158935 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 |||||||| ||||||||||||| ||||| || || ||||| ||||| ||| ||| || Sbjct 158934 TTTCCAGCAAAGATGAGACGCTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTG 158875 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | ||||| |||||| | ||| ||||| | || | |||||||| || Sbjct 158874 GCCTTAACATTTTCGATGGTGTCGGAAGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTA 158815 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || || || |||||||| ||||| Sbjct 158814 AGGGTCTTGACAAAAATTTGCAT 158792 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| |||||| || ||||| || ||||| ||||| | ||||| ||| || | ||| Sbjct 157534 TGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGC 157475 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 |||||||| |||||||||| || ||||| || || ||||| ||||| ||| ||| ||| Sbjct 157474 TTTCCAGCAAAGATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTT 157415 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | ||||| ||||| | ||| ||||| | ||| | ||| ||||| || Sbjct 157414 GCCTTCACATTTTCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTG 157355 Query 118716 AGAGTTTTTACAAAAATCTGCATG 118739 || || || || |||||||||||| Sbjct 157354 AGTGTCTTCACGAAAATCTGCATG 157331 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || |||||||||||||| || || || || || || || | ||| |||||| Sbjct 158211 GTGGATTCTTTTTGAATGTTATAGTCTGACAATGTTCGGCCGTCTTCCAACTGCTTTCCA 158152 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || ||||||||||||||||||| || || || || ||||| ||| ||| || ||| Sbjct 158151 GCAAAGATGAGACGCTGCTGATCTGGGGGGATACCTTCCTTATCTTGAATCTTAGCCTTA 158092 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||||| |||||| | | ||| || || | || | || || || || || || Sbjct 158091 ACATTTTCGATGGTGTCAGAGGGCTCCACTTCCAATGTGATGGTCTTTCCTGTAAGGGTC 158032 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 158031 TTGACAAAGATCTGCAT 158015 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || |||||||| || ||||| ||||| | || || |||||| || || |||||| Sbjct 158760 GTGGATTCTTTTTGGATATTGTAGTCGCTGAGGGTACGACCATCCTCAAGTTGCTTTCCA 158701 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || ||||||||||||||||||| || || || || ||||| ||| || ||| || Sbjct 158700 GCAAAGATGAGACGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGGATCTTTGCCTTG 158641 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| || || ||||| | || | || || || |||| || Sbjct 158640 ACATTCTCGATCGTGTCACTGGGTTCCACCTCTAAAGTGATGGTCTTTCCAGTCAACGTC 158581 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 158580 TTGACGAAGATCTGCAT 158564 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599 || || ||||| |||||||| || || | | || | ||| ||| || | ||||| | Sbjct 159216 GTGGATTCTTTCTGAATGTTATAGTC--TGAAAGGGTACGTCCATCTTCCAATTGTTTGC 159159 Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659 |||| |||| ||||||||||| || || || ||||| ||||||||| || || | Sbjct 159158 CAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGGCCT 159099 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719 | || | |||| ||||| || || ||||| | ||| | || || || |||| || Sbjct 159098 TGACATTCTCGATCGTGTCACTGGGTTCTACCTCTAAGGTGATGGTCTTTCCAGTCAAAG 159039 Query 118720 TTTTTACAAAAATCTGCATG 118739 |||| || || ||||||||| Sbjct 159038 TTTTGACGAAGATCTGCATG 159019 >seq47 Length=390960 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| ||||||||||||||||| | ||||| |||||| | ||| |||||| Sbjct 276510 GTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGACCATCCTCCAACTGCTTTCCA 276569 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || ||||||||||| || || || || |||||||| ||| || || || Sbjct 276570 GCAAAAATAAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTATCTTGGATCTTAGCCTTG 276629 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | |||||| || || ||||||| || | || ||||| || ||||| Sbjct 276630 ACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTC 276689 Query 118722 TTTACAAAA 118730 || |||||| Sbjct 276690 TTGACAAAA 276698 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| ||||||||||||||||| | || || |||||| | |||||| ||| Sbjct 276737 GTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTACCA 276796 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || ||||||||||| || || || || || ||||| || || || || Sbjct 276797 GCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTC 276856 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | |||||| || || ||||||| || | || ||||| || ||||| Sbjct 276857 ACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTC 276916 Query 118722 TTTACAAAAATCTGCAT 118738 || |||||||||||||| Sbjct 276917 TTGACAAAAATCTGCAT 276933 Score = 105 bits (116), Expect = 6e-18 Identities = 143/198 (72%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTT-CC 118600 |||||||| ||||||||||||||||| | || || |||||| | ||||||| || Sbjct 276281 GTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTTACC 276340 Query 118601 AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTT 118660 ||| | || ||||||||||| || || || || || ||||| || || || || Sbjct 276341 AGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTT 276400 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | ||| | |||||| || || ||||||| || | || ||||| || ||||| Sbjct 276401 CACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGT 276460 Query 118721 TTTTACAAAAATCTGCAT 118738 || |||||||||||||| Sbjct 276461 CTTGACAAAAATCTGCAT 276478 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/199 (71%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| ||||||||||||||||| | || || |||||| | |||||||||| Sbjct 277431 GTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTTCCA 277490 Query 118602 GCGTAGATGAGACGCTGCTG--ATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659 || |||| ||||||||| | || || || || || ||||| || || || | Sbjct 277491 GCAAAGATAAGACGCTGCCGGCGTCTGGTGG-ATCCCTTCCTTATCCTGGATCTTGGCCT 277549 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719 | || | ||| | ||||| | ||| ||||||| || | || ||||| || |||| Sbjct 277550 TCACATTTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAG 277609 Query 118720 TTTTTACAAAAATCTGCAT 118738 | || |||||||||||||| Sbjct 277610 TCTTGACAAAAATCTGCAT 277628 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 118544 AGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA- 118601 |||||| ||||||||||||||||| | ||||| ||| | | ||| |||||| Sbjct 276969 AGACTCCTTTTGAATGTTGTAATCAGAAAGGGGTGCGACCATCTCCCAACTGCTTTCCAA 277028 Query 118602 -GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC-TGTAATTTTTTGTT 118659 | | || ||||||||||| || || || || |||||||| || || ||| || | Sbjct 277029 GCCAAAAATAAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTATCTTGGAATCTTAGCCT 277088 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719 | || | ||| | |||||| || || ||||||| || | || ||||| || |||| Sbjct 277089 TGACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAG 277148 Query 118720 TTTTTACAAAAATCTGCAT 118738 | || |||||||| ||||| Sbjct 277149 TCTTGACAAAAATTTGCAT 277167 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| || | ||| | || ||||| |||||||| ||||||||| | || || ||| Sbjct 276041 CAAAACAAGGTGAAGAGTTGACTCCTTTTGAATATTGTAATCGGAGAAGGTACGGCCATC 276100 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| | ||||||| || | || ||||||||||| || || || || || ||||| || Sbjct 276101 CTCCA-CTGTTTTT--GCAAAAATAAGACGCTGCTGGTCTGGTGG-ATCCCTTCCTTATC 276156 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || ||| || | ||| | ||||| | ||| ||||||| || | || Sbjct 276157 CTGGATCTTGCCTTTCACATTTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATGGT 276216 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || ||||| || |||||||||||||| Sbjct 276217 CTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276249 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| ||||||||||||||||| | || || ||| || | |||||||| | Sbjct 277660 GTAGACTCCTTTTGAATGTTGTAATCAGAAAGCGTACGGCCATC-TCCAACTGTTTTC-A 277717 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| ||||||||||| || || || || || ||||| || || || || Sbjct 277718 GCAAAGATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTC 277777 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | ||||| | ||| ||||||| || | || ||||| || || || Sbjct 277778 ACATTTTCAATAGTGTCGGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTC 277837 Query 118722 TTTACAAAAATCTGCATG 118739 || || ||||| |||||| Sbjct 277838 TTCACGAAAATTTGCATG 277855 >seq263 Length=158529 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| |||||||||||||| || || | || | ||| ||||||||||| || Sbjct 64855 GTTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTCCTACCATCTTCGAGCTGTTTACCG 64914 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | |||||| || || || || || |||||||||||| || || || Sbjct 64915 GCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTG 64974 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||||| || || || || ||||| | ||| | ||||| || |||| ||| Sbjct 64975 ACATTTTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGTTTTCCCAGTCAATGTT 65034 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 65035 TTCACAAAGATCTGCAT 65051 >seq463 Length=112955 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGA 118608 |||||||||||||||||| | |||| | | ||||||||| |||||||| || ||| Sbjct 58489 TTTTGAATGTTGTAATCGG--AGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGA 58432 Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668 | | ||||||||||| || || || ||||||||||| || || || || | | Sbjct 58431 TCAACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 58372 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| ||||| || || ||||| | || | ||||| || || || ||||| || | Sbjct 58371 CGATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGA 58312 Query 118729 AAATCTGCAT 118738 |||||||||| Sbjct 58311 AAATCTGCAT 58302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433780688730184