Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq1672 93.3 4e-14
>seq1672
Length=38749
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 16529 TACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCG 16588
|||||||| ||||| | ||| ||||| || |||||||| || |||||||||| ||||||
Sbjct 32218 TACATTTCGGAATGCACATTTTCCATCGCAATCTGAAATCCGTAAAAGCATCGGGCTTCG 32159
Query 16589 GATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTA 16648
| | ||| ||||| | || | || | |||||||||||||| ||||||||
Sbjct 32158 GTGACTTGCACTTCCTGGCTGAATCGCTCCACCAAGTTTTCGTTAACAATTCCATCAGAT 32099
Query 16649 GCTGCAAAAAACGC 16662
|||||||| || ||
Sbjct 32098 GCTGCAAAGAAGGC 32085
Score = 91.5 bits (100), Expect = 1e-13
Identities = 109/145 (75%), Gaps = 6/145 (4%)
Strand=Plus/Minus
Query 15882 AACTTTAAAAATCAATATCTAGAGAAAACAC-ATT--ATCTTTTTTATTTGACATAACTG 15938
|| ||||||||||| ||| || | ||| || ||| ||| ||||| || ||| |||
Sbjct 33153 AATTTTAAAAATCAGCATCCAGGGTAAATACCATTTCATCCTTTTTGTT---CATGACTC 33097
Query 15939 ACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAA 15998
||||| || || | ||| ||||||||||||| |||||||| ||||| | ||| |
Sbjct 33096 CTGCCTTTTGGTACTCGCCAACCTTCTTTTCAAAGAAGTTTGTTTTGCCTTCCAGTGAGA 33037
Query 15999 TATTTTCCATAAAATCAAAAGGATT 16023
||| |||||||||||||| |||||
Sbjct 33036 TATGCTCCATAAAATCAAAGGGATT 33012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462457643277200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |