Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq30 111 1e-19 >seq30 Length=458414 Score = 111 bits (122), Expect = 1e-19 Identities = 310/471 (66%), Gaps = 10/471 (2%) Strand=Plus/Minus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| || | || || ||||| || ||||||||||| |||| || ||| | | ||| Sbjct 345552 TTTCCATTGCTGACCACCAAACGTGTTTTTTGGAAAGGAATTGTGGAGGAGCTTCTGTGG 345493 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGC 20163 ||| | || |||| |||||| | | ||||| || ||||||||| | |||||| Sbjct 345492 TTTGTGAAGGGATGTACAAATGCAAATGAGCTGAAAGCTAAAGGAGTTCACATTTGGGAT 345433 Query 20164 GCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGGGGGA 20222 | | | || | | |||| | ||| ||||| || || | || | || || || Sbjct 345432 GGAAACTCTTCCAGGGAATTCCTGGACAA-AATGGGATTCACTGATCGGGAGGAAGGTGA 345374 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC-ATGA 20281 |||| ||||||||||| ||||||||| | || |||||||| || ||| ||| |||| Sbjct 345373 CCTGGGACCTGTGTATGGCTTTCAATGGCGTCACTTTGGAGCAGAGTATAA-GACTATGA 345315 Query 20282 ACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAA 20341 | || ||| ||||||||||| ||||| ||||| | || ||| | | || |||| Sbjct 345314 AAGATAACTATGAGGGACAAGGAGTTGATCAGTTACAGCAAGTAATTGACATGATCAAAA 345255 Query 20342 CGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAA 20401 | || | | || | ||||| | || ||||| || |||| | | || Sbjct 345254 ATGATCCGTATTCCCGACGGATTATCATGACTGCGTGGAATCCTTCAGATCTACTCCAAA 345195 Query 20402 TGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT------TGCTAATAATGAAT 20455 |||| || || || ||||| ||| ||| ||||| || ||| || ||||| | Sbjct 345194 TGGCATTACCACCGTGTCACTGTCTAGCCCAGTTTTATGTGGATCCTGCAAAGAATGAGT 345135 Query 20456 TGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTT 20506 || || || | || || | || || || || ||||| ||| | |||| Sbjct 345134 TGAGTTGCCAGCTTTACCAGAGGTCTGCGGACATTGGACTTGGTATGCCTT 345084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399138258752890