Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq159 102 6e-17 >seq159 Length=219009 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| |||||| || |||||||||||| | || || | || || ||||| Sbjct 157762 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGC 157703 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||| || || ||||| ||||| ||||| || || | || |||||||| || || Sbjct 157702 TTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTA 157643 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||| | ||||||||| | ||| |||||||| || ||| Sbjct 157642 GCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTC 157583 Query 45314 AGAGTCTTCACAAAGATTTGCATG 45337 | |||||| |||||||| |||||| Sbjct 157582 AAAGTCTTGACAAAGATCTGCATG 157559 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/205 (71%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| |||||| || |||||||||||| | || || | || || ||||| Sbjct 159451 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCCTCAAGTTGC 159392 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||| || || ||||| ||||| ||||| || || | || |||||||| || || Sbjct 159391 TTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTA 159332 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC-TTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| |||||| || || || Sbjct 159331 GCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGT 159272 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || |||||| |||||||| |||||| Sbjct 159271 CAAAGTCTTGACAAAGATCTGCATG 159247 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||| || || ||||||||| | || |||| | || |||| || ||||| || || Sbjct 157522 TCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGCTTTCCAGCAAAG 157463 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | || ||||| || || || | || ||||| || ||| ||| ||| || Sbjct 157462 ATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTTGCCTTCACATTT 157403 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | |||| | ||||||||| | ||| ||||||||||| || || |||||||| Sbjct 157402 TCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTGAGTGTCTTCACG 157343 Query 45326 AAGATTTGCATGTTG 45340 || || |||||| || Sbjct 157342 AAAATCTGCATGATG 157328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395029929567442