Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq159 102 6e-17
>seq159
Length=219009
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
|| || ||| |||||| || |||||||||||| | || || | || || |||||
Sbjct 157762 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGC 157703
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
||||| || || ||||| ||||| ||||| || || | || |||||||| || ||
Sbjct 157702 TTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTA 157643
Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313
||| || | | | |||| | ||||||||| | ||| |||||||| || |||
Sbjct 157642 GCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTC 157583
Query 45314 AGAGTCTTCACAAAGATTTGCATG 45337
| |||||| |||||||| ||||||
Sbjct 157582 AAAGTCTTGACAAAGATCTGCATG 157559
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/205 (71%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
|| || ||| |||||| || |||||||||||| | || || | || || |||||
Sbjct 159451 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCCTCAAGTTGC 159392
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
||||| || || ||||| ||||| ||||| || || | || |||||||| || ||
Sbjct 159391 TTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTA 159332
Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC-TTGCCCGT 45312
||| || | | | |||| | ||||||||| | ||| |||||| || || ||
Sbjct 159331 GCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGT 159272
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
|| |||||| |||||||| ||||||
Sbjct 159271 CAAAGTCTTGACAAAGATCTGCATG 159247
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||| || || ||||||||| | || |||| | || |||| || ||||| || ||
Sbjct 157522 TCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGCTTTCCAGCAAAG 157463
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|| | || ||||| || || || | || ||||| || ||| ||| ||| ||
Sbjct 157462 ATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTTGCCTTCACATTT 157403
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | |||| | ||||||||| | ||| ||||||||||| || || ||||||||
Sbjct 157402 TCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTGAGTGTCTTCACG 157343
Query 45326 AAGATTTGCATGTTG 45340
|| || |||||| ||
Sbjct 157342 AAAATCTGCATGATG 157328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395029929567442
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |