Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1326 122 1e-22
seq1672 102 1e-16
>seq1326
Length=48828
Score = 122 bits (134), Expect = 1e-22
Identities = 121/157 (77%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240
|| |||||||||||||| || ||||||| || |||||||| || || | ||| |
Sbjct 34369 ACCTGAAATTCTCCAGATAACACTCTCCTCGTATAAATATTTGAAGTGTATGCTTCAATG 34310
Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300
|||||||| || ||||||||||| ||||| |||||||| ||||| || |||| | ||||
Sbjct 34309 GACTCATTGTTGCCCAAAATTTGGGCAGTAGATGCAGTAGGCATTGGAGCCAAAAGTAAA 34250
Query 65301 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTA 65337
||||| |||||||| | || ||||| | |||||
Sbjct 34249 GAATTTCGAAGACCGTGTTGACTTATTTTCTGTTTTA 34213
Score = 116 bits (128), Expect = 5e-21
Identities = 199/287 (69%), Gaps = 9/287 (3%)
Strand=Plus/Minus
Query 65628 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 65687
||||| ||||| | || || ||||| || || ||||| | || || || |||
Sbjct 33753 GGATAGTAATTCACGTCGATGATTTTGTTCAGGTTTCTTGTGACCACCTTACTAACTTCC 33694
Query 65688 TTCAGTTTGAGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGCAACAGAT 65744
|||| ||| |||||| || || ||| | | ||| |||| |||| |||| ||||
Sbjct 33693 TTCAATTTCTTGAAATCATATGTGCGATCAGGTTTCACATACATATTCACAGCAATAGAT 33634
Query 65745 GCCAGATTACAAACGGCTACCTCAT---TAGCATCCGCATATTGTATTATCTCAGTGCAA 65801
|||| ||| || ||||||| |||| | | | | ||| | | ||| ||||||||
Sbjct 33633 GCCAAATTGCACACGGCTATTTCATCCTTTGAA---GAATACTCGACTATTTCAGTGCAC 33577
Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861
| ||| ||| ||||||||||| | ||| || ||||| ||| ||||||||||||
Sbjct 33576 AAATTTGAACATTTGATGGTTCCAAGATTCTGCTGATTGGATTTTCGATTACACGCATCC 33517
Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAAT 65908
|| || | | | |||| || |||||||| || || ||||| |||||
Sbjct 33516 TTGTACAACAAGTATGGTGTTCCAGTTTCGATTTGGGATTCAATAAT 33470
Score = 86.0 bits (94), Expect = 8e-12
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 66809 tttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATC 66868
||| |||||||| || || | || || ||||| || || || || | ||| ||||||||
Sbjct 32200 TTTCTTTGTTTCCTTATGCAAGTTAGAAACGGCAATCCTGGCAGCAAGAATCGCATAATC 32141
Query 66869 CGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGT 66928
|||||| | |||||| |||| || || | || || |||| | |||| | ||| || ||
Sbjct 32140 CGGATGGTTTGTAGTTAAAGTAGCAGCAGTCTCAGCAGCCAAATTGTCAAGTTCCACAGT 32081
Query 66929 TGTTACTCCA 66938
||| ||||||
Sbjct 32080 TGTAACTCCA 32071
>seq1672
Length=38749
Score = 102 bits (112), Expect = 1e-16
Identities = 127/174 (73%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477
||| |||| || || ||||||||||| |||||||| ||||| | ||||| || ||
Sbjct 32249 ATCCTTAATGTACGTGTCAATCAAAAGGGAGTACATTTCGGAATGCACATTTTCCATCGC 32190
Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537
|| ||||||||||| || |||| || ||||| | || ||||| | ||||| ||
Sbjct 32189 AATCTGAAATCCGTAAAAGCATCGGGCTTCGGTGACTTGCACTTCCTGGCTGAATCGCTC 32130
Query 36538 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 36591
| || ||||| || || ||||| ||| |||||||| || ||||| |||||
Sbjct 32129 CACCAAGTTTTCGTTAACAATTCCATCAGATGCTGCAAAGAAGGCCAAGACATG 32076
Score = 96.9 bits (106), Expect = 5e-15
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703
|| || | ||||||||||||||| |||||||| || ||||| ||||| || ||||| | |
Sbjct 31924 TTTGAAAGATCCACTTCTTCCACAGTCCAAAAGGAAGCCTCGGCCTTCTTGTACATTTGC 31865
Query 36704 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 36741
||||| |||||||| ||||| || |||| ||| || ||
Sbjct 31864 CAGATATCATGATACTGAATGGGGAAAACAACGAACCT 31827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658095448241680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |